RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ZNF697Q5TEC3 545 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 RASIP1Q5U651 963 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 PSRC1Q6PGN9 363 aaPredicted RBP20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 NFXL1Q6ZNB6 911 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 SGMS1Q86VZ5 419 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 RRP36Q96EU6 259 aaKnown RBP20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 MYL10Q9BUA6 226 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 IL23AQ9NPF7 189 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 BAZ2BQ9UIF8 2168 aaKnown RBP20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 STXBP5LQ9Y2K9 1186 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.73■□□□□ 0.91
CHMP2A-203ENST00000597209 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.73■□□□□ 0.91
CHMP2A-203ENST00000597209 RGS20O76081 388 aa20.73■□□□□ 0.91
CHMP2A-203ENST00000597209 LAMC2Q13753 1193 aa20.73■□□□□ 0.91
CHMP2A-203ENST00000597209 AFG1LQ8WV93 481 aa20.73■□□□□ 0.91
CHMP2A-203ENST00000597209 CCDC136Q96JN2 1154 aa20.73■□□□□ 0.91
CHMP2A-203ENST00000597209 NEK1Q96PY6 1258 aa20.73■□□□□ 0.91
CHMP2A-203ENST00000597209 MRVI1Q9Y6F6 885 aa20.73■□□□□ 0.91
CHMP2A-203ENST00000597209 FRMPD4Q14CM0 1322 aa20.73■□□□□ 0.91
CHMP2A-203ENST00000597209 TMEM265A0A087WTH1 108 aa20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 TGFB3P10600 412 aa20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 MYCLP12524 364 aaPredicted RBP20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 CASTP20810 708 aaKnown RBP20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 CCND2P30279 289 aa20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 SRBD1Q8N5C6 995 aaKnown RBP20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 TRMT13Q9NUP7 481 aaKnown RBP20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 SEC63Q9UGP8 760 aaKnown RBP20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 SLC12A7Q9Y666 1083 aa20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 UMODL1Q5DID0 1318 aa20.72■□□□□ 0.91
CHMP2A-203ENST00000597209 EXOSC10Q01780 885 aaKnown RBP20.71■□□□□ 0.91
CHMP2A-203ENST00000597209 DGKDQ16760 1214 aa20.71■□□□□ 0.91
CHMP2A-203ENST00000597209 ZNF365Q70YC5 407 aa20.71■□□□□ 0.91
CHMP2A-203ENST00000597209 SESTD1Q86VW0 696 aa20.71■□□□□ 0.91
CHMP2A-203ENST00000597209 PPTC7Q8NI37 304 aa20.71■□□□□ 0.91
CHMP2A-203ENST00000597209 WNT8AQ9H1J5 351 aa20.71■□□□□ 0.91
CHMP2A-203ENST00000597209 PIK3CDO00329 1044 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 STAM2O75886 525 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 PLEKHA8P1O95397 391 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 KRT32Q14532 448 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 FAM47CQ5HY64 1035 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 FCHSD1Q86WN1 690 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 DHX37Q8IY37 1157 aaKnown RBP20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 RPUSD2Q8IZ73 545 aaKnown RBP20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 FANCBQ8NB91 859 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 IL31RAQ8NI17 732 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 PIBF1Q8WXW3 757 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 HERVK_113Q902F9 699 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 KAT2BQ92831 832 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 GUCD1Q96NT3 240 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 SEMA6BQ9H3T3 888 aa20.7■□□□□ 0.9
CHMP2A-203ENST00000597209 FGBP02675 491 aa20.69■□□□□ 0.9
CHMP2A-203ENST00000597209 ACRP10323 421 aa20.69■□□□□ 0.9
CHMP2A-203ENST00000597209 HOXD8P13378 290 aaPredicted RBP20.69■□□□□ 0.9
CHMP2A-203ENST00000597209 CCL23P55773 120 aa20.69■□□□□ 0.9
CHMP2A-203ENST00000597209 CELF3Q5SZQ8 465 aaKnown RBP20.69■□□□□ 0.9
CHMP2A-203ENST00000597209 MYSM1Q5VVJ2 828 aa20.69■□□□□ 0.9
CHMP2A-203ENST00000597209 SYNE3Q6ZMZ3 975 aa20.69■□□□□ 0.9
CHMP2A-203ENST00000597209 DHX32Q7L7V1 743 aaKnown RBP20.69■□□□□ 0.9
CHMP2A-203ENST00000597209 LRRC2Q9BYS8 371 aa20.69■□□□□ 0.9
CHMP2A-203ENST00000597209 PPFIA4O75335 1185 aa20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 CYP2C9P11712 490 aa20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 RXRAP19793 462 aa20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 XRRA1Q6P2D8 792 aa20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 TMTC3Q6ZXV5 915 aa20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 RASEFQ8IZ41 740 aa20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 SMARCC2Q8TAQ2 1214 aa20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 KCNB2Q92953 911 aa20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 CUL5Q93034 780 aa20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 MTIF3Q9H2K0 278 aaKnown RBP20.68■□□□□ 0.9
CHMP2A-203ENST00000597209 PITPNM1O00562 1244 aa20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 MEIS2O14770 477 aa20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 PFKMP08237 780 aa20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 HMGB1P09429 215 aaKnown RBP20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 ICAM3P32942 547 aa20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 RFC2P35250 354 aa20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 SP2Q02086 613 aa20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 GNPTABQ3T906 1256 aa20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 INPP4AQ96PE3 977 aaPredicted RBP20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 KATNAL1Q9BW62 490 aa20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 TTYH1Q9H313 450 aaPredicted RBP20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 RBM28Q9NW13 759 aaKnown RBP20.67■□□□□ 0.9
CHMP2A-203ENST00000597209 HAS3O00219 553 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 GGPS1O95749 300 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 F2P00734 622 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 UBA1P22314 1058 aaKnown RBP20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 MRPS9P82933 396 aaKnown RBP20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 ADCK5Q3MIX3 580 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 APOA5Q6Q788 366 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 USP17L6PQ6QN14 398 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 CMTR1Q8N1G2 835 aaKnown RBP20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 VWCEQ96DN2 955 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 FAM161BQ96MY7 647 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 SPATA33Q96N06 139 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 MYH7BA7E2Y1 1941 aa20.66■□□□□ 0.9
CHMP2A-203ENST00000597209 DNAJB2P25686 324 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 PSEN2P49810 448 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 RCAN1P53805 252 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 BFSP2Q13515 415 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 PTGISQ16647 500 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 HSDL1Q3SXM5 330 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms