RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 UBE2OQ9C0C9 1292 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 FRMPD4Q14CM0 1322 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 CNTNAP5Q8WYK1 1306 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 PIK3CDO00329 1044 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 MYCLP12524 364 aaPredicted RBP21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 CASTP20810 708 aaKnown RBP21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 CPT1AP50416 773 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 PURAQ00577 322 aaKnown RBP21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 APOBRQ0VD83 1088 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 USP17L6PQ6QN14 398 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 FAM126BQ8IXS8 530 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 BADQ92934 168 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 BRF1Q92994 677 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 TMEM39AQ9NV64 488 aa21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 DDX41Q9UJV9 622 aaKnown RBP21.33■■□□□ 1.01
SHKBP1-202ENST00000593764 MROH7Q68CQ1 1323 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 LTBP2Q14767 1821 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 GOLGA8AA7E2F4 631 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 GOLGA8BA8MQT2 603 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 PSMA5P28066 241 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 PSMC6P62333 389 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 ARHGAP1Q07960 439 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 ITGA7Q13683 1181 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 ZFP91Q96JP5 570 aaPredicted RBP21.32■■□□□ 1
SHKBP1-202ENST00000593764 POLR3EQ9NVU0 708 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 TBX21Q9UL17 535 aa21.32■■□□□ 1
SHKBP1-202ENST00000593764 GH1P01241 217 aa21.31■■□□□ 1
SHKBP1-202ENST00000593764 CD4P01730 458 aa21.31■■□□□ 1
SHKBP1-202ENST00000593764 CCND2P30279 289 aa21.31■■□□□ 1
SHKBP1-202ENST00000593764 ADD1P35611 737 aaKnown RBP21.31■■□□□ 1
SHKBP1-202ENST00000593764 FGD1P98174 961 aa21.31■■□□□ 1
SHKBP1-202ENST00000593764 TDHQ8IZJ6 230 aa21.31■■□□□ 1
SHKBP1-202ENST00000593764 PSTPIP2Q9H939 334 aa21.31■■□□□ 1
SHKBP1-202ENST00000593764 ZSWIM6Q9HCJ5 1215 aa21.31■■□□□ 1
SHKBP1-202ENST00000593764 V9GY48 417 aaPredicted RBP21.31■■□□□ 1
SHKBP1-202ENST00000593764 MYL3P08590 195 aa21.3■■□□□ 1
SHKBP1-202ENST00000593764 MRPS9P82933 396 aaKnown RBP21.3■■□□□ 1
SHKBP1-202ENST00000593764 RUFY3Q7L099 469 aa21.3■■□□□ 1
SHKBP1-202ENST00000593764 AFG1LQ8WV93 481 aa21.3■■□□□ 1
SHKBP1-202ENST00000593764 GPKOWQ92917 476 aaPredicted RBP eCLIP21.3■■□□□ 1
SHKBP1-202ENST00000593764 MRVI1Q9Y6F6 885 aa21.3■■□□□ 1
SHKBP1-202ENST00000593764 SOX1O00570 391 aaPredicted RBP21.29■■□□□ 1
SHKBP1-202ENST00000593764 EVCP57679 992 aa21.29■■□□□ 1
SHKBP1-202ENST00000593764 SP2Q02086 613 aa21.29■■□□□ 1
SHKBP1-202ENST00000593764 BRDTQ58F21 947 aaPredicted RBP21.29■■□□□ 1
SHKBP1-202ENST00000593764 WWC2Q6AWC2 1192 aa21.29■■□□□ 1
SHKBP1-202ENST00000593764 TYW1BQ6NUM6 668 aa21.29■■□□□ 1
SHKBP1-202ENST00000593764 HEATR3Q7Z4Q2 680 aa21.29■■□□□ 1
SHKBP1-202ENST00000593764 SMARCC2Q8TAQ2 1214 aa21.29■■□□□ 1
SHKBP1-202ENST00000593764 CUL5Q93034 780 aa21.29■■□□□ 1
SHKBP1-202ENST00000593764 EMID1Q96A84 441 aaPredicted RBP21.29■■□□□ 1
SHKBP1-202ENST00000593764 MTG1Q9BT17 334 aaPredicted RBP21.29■■□□□ 1
SHKBP1-202ENST00000593764 SEZ6LQ9BYH1 1024 aa21.29■■□□□ 1
SHKBP1-202ENST00000593764 NAP1L2Q9ULW6 460 aaPredicted RBP21.29■■□□□ 1
SHKBP1-202ENST00000593764 NID2Q14112 1375 aa21.28■■□□□ 1
SHKBP1-202ENST00000593764 KPNA6O60684 536 aa21.28■■□□□ 1
SHKBP1-202ENST00000593764 RAG1P15918 1043 aa21.28■■□□□ 1
SHKBP1-202ENST00000593764 METAP2P50579 478 aaKnown RBP eCLIP21.28■■□□□ 1
SHKBP1-202ENST00000593764 TM6SF1Q9BZW5 370 aa21.28■■□□□ 1
SHKBP1-202ENST00000593764 SCN10AQ9Y5Y9 1956 aa21.28■■□□□ 1
SHKBP1-202ENST00000593764 B4GALT4O60513 344 aa21.27■■□□□ 1
SHKBP1-202ENST00000593764 TIMP1P01033 207 aa21.27■■□□□ 1
SHKBP1-202ENST00000593764 MMP3P08254 477 aa21.27■■□□□ 1
SHKBP1-202ENST00000593764 TGFB3P10600 412 aa21.27■■□□□ 1
SHKBP1-202ENST00000593764 TOB2Q14106 344 aaPredicted RBP21.27■■□□□ 1
SHKBP1-202ENST00000593764 UBE2SQ16763 222 aa21.27■■□□□ 1
SHKBP1-202ENST00000593764 MYSM1Q5VVJ2 828 aa21.27■■□□□ 1
SHKBP1-202ENST00000593764 KCNV1Q6PIU1 500 aa21.27■■□□□ 1
SHKBP1-202ENST00000593764 INPP4AQ96PE3 977 aaPredicted RBP21.27■■□□□ 1
SHKBP1-202ENST00000593764 TRPV6Q9H1D0 765 aa21.27■■□□□ 1
SHKBP1-202ENST00000593764 CCDC196A0A1B0GTZ2 297 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 STXBP3O00186 592 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 TLR3O15455 904 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 STAM2O75886 525 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 PDIA3P30101 505 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 EPHB4P54760 987 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 SEMA3FQ13275 785 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 LAMC2Q13753 1193 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 NBPF20Q3BBV1 942 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 LRIT3Q3SXY7 679 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 CELF3Q5SZQ8 465 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 PCNX4Q63HM2 1172 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 DHX37Q8IY37 1157 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 ALDH8A1Q9H2A2 487 aaPredicted RBP21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 BCAS3Q9H6U6 928 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 RTEL1Q9NZ71 1219 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 CYP46A1Q9Y6A2 500 aa21.26■□□□□ 0.99
SHKBP1-202ENST00000593764 UBA1P22314 1058 aaKnown RBP21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 ICAM3P32942 547 aa21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 C9orf50Q5SZB4 431 aa21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 XRRA1Q6P2D8 792 aa21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 PPTC7Q8NI37 304 aa21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 PPP1R13LQ8WUF5 828 aa21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 KAT2BQ92831 832 aa21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 LRCH3Q96II8 777 aa21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 UPF3BQ9BZI7 483 aaKnown RBP21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 BARHL2Q9NY43 387 aa21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 MYH7BA7E2Y1 1941 aa21.25■□□□□ 0.99
SHKBP1-202ENST00000593764 SPATA31C2B4DYI2 1134 aa21.24■□□□□ 0.99
SHKBP1-202ENST00000593764 HOXD8P13378 290 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms