RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 PALD1Q9ULE6 856 aa13.65□□□□□ -0.22
CAPNS1-209ENST00000590049 DNAJC25-GNG10A0A024R161 153 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 RNF113AO15541 343 aaKnown RBP13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 DYNC1LI2O43237 492 aaPredicted RBP13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 PARNO95453 639 aaKnown RBP13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 CXCL10P02778 98 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 SMPD1P17405 629 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 CHMLP26374 656 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 MFAP1P55081 439 aaKnown RBP13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 GPNMBQ14956 572 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 FAM47CQ5HY64 1035 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 SLC9C2Q5TAH2 1124 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 KIAA1211Q6ZU35 1233 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 ARMCX2Q7L311 632 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 CCDC155Q8N6L0 562 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 EFHBQ8N7U6 833 aa13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 SH3RF3Q8TEJ3 882 aaPredicted RBP13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 C11orf84Q9BUA3 381 aaPredicted RBP13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 PIH1D3Q9NQM4 214 aaKnown RBP13.64□□□□□ -0.23
CAPNS1-209ENST00000590049 TAF4O00268 1085 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 GRM6O15303 877 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 REC8O95072 547 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 AMHP03971 560 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 PMLP29590 882 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 RING1Q06587 406 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 ABCB5Q2M3G0 1257 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 TCTN1Q2MV58 587 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 C8orf34Q49A92 452 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 VARS2Q5ST30 1063 aaKnown RBP13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 TATDN1Q6P1N9 297 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 TMED8Q6PL24 325 aaPredicted RBP13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 MAPKAPK5Q8IW41 473 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 CAGE1Q8TC20 777 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 SUSD6Q92537 303 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 YME1L1Q96TA2 773 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 NOL10Q9BSC4 688 aaKnown RBP13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 KATNBL1Q9H079 304 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 CABP5Q9NP86 173 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 NOD1Q9Y239 953 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 RAD50Q92878 1312 aa13.63□□□□□ -0.23
CAPNS1-209ENST00000590049 ATG2AQ2TAZ0 1938 aa13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 RB1P06400 928 aa13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 NMIQ13287 307 aaPredicted RBP13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 UBE3CQ15386 1083 aa13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 PRR23BQ6ZRT6 265 aa13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 MYOCDQ8IZQ8 938 aa13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 APPBP2Q92624 585 aa13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 SECISBP2LQ93073 1101 aaKnown RBP13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 HELLSQ9NRZ9 838 aa13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 BARX2Q9UMQ3 279 aaPredicted RBP13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 FLT1P17948 1338 aa13.62□□□□□ -0.23
CAPNS1-209ENST00000590049 MYH7P12883 1935 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 C5orf67F2Z3F1 127 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 SELPP16109 830 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 PDE6AP16499 860 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 CTNNB1P35222 781 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 ADD2P35612 726 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 CERKLQ49MI3 558 aaPredicted RBP13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 MCMDC2Q4G0Z9 681 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 LRRC8DQ7L1W4 858 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 TGFBRAP1Q8WUH2 860 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 SMOC2Q9H3U7 446 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 POLR3EQ9NVU0 708 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 ZNF532Q9HCE3 1301 aa13.61□□□□□ -0.23
CAPNS1-209ENST00000590049 KINO60870 393 aaKnown RBP13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 NBNO60934 754 aa13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 CSPG5O95196 566 aa13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 IGF2RP11717 2491 aa13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 CYP7A1P22680 504 aa13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 CCDC144CPQ8IYA2 1237 aa13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 KDF1Q8NAX2 398 aaPredicted RBP13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 RIN2Q8WYP3 895 aaPredicted RBP13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 NSUN4Q96CB9 384 aaKnown RBP13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 ADAMTS5Q9UNA0 930 aa13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 Q9Y3F1 56 aa13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 NR2E1Q9Y466 385 aa13.6□□□□□ -0.23
CAPNS1-209ENST00000590049 SMG1Q96Q15 3661 aaKnown RBP13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 MMP1P03956 469 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 ARP10275 920 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 PLCG2P16885 1265 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 NPR3P17342 541 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 PTGS1P23219 599 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 SP100P23497 879 aaPredicted RBP13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 ZMYM1Q5SVZ6 1142 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 FAM227BQ96M60 508 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 ANKFY1Q9P2R3 1169 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 SAP30BPQ9UHR5 308 aaKnown RBP13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 ZNF214Q9UL59 606 aaPredicted RBP13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 USP18Q9UMW8 372 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 NBEAQ8NFP9 2946 aa13.59□□□□□ -0.23
CAPNS1-209ENST00000590049 MCM3APO60318 1980 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 USP9XQ93008 2570 aaPredicted RBP13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 A0A0D9SFI3 127 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms