RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 IFNAR1P17181 557 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 GNPTABQ3T906 1256 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 MROH7Q68CQ1 1323 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 CCDC62Q6P9F0 684 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 USP17L6PQ6QN14 398 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 CCDC12Q8WUD4 166 aaPredicted RBP18.87■□□□□ 0.61
DNMT1-221ENST00000589538 GPKOWQ92917 476 aaPredicted RBP eCLIP18.87■□□□□ 0.61
DNMT1-221ENST00000589538 VTI1AQ96AJ9 217 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 RNF26Q9BY78 433 aaPredicted RBP18.87■□□□□ 0.61
DNMT1-221ENST00000589538 POLR3EQ9NVU0 708 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 MRVI1Q9Y6F6 885 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 SPDYE3A6NKU9 549 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 STXBP3O00186 592 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 CPLX1O14810 134 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 KPNA6O60684 536 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 GH1P01241 217 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 TGFB3P10600 412 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 ADCY7P51828 1080 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 BEX3Q00994 111 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 C8orf34Q49A92 452 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 TRIM22Q8IYM9 498 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 RIC8AQ9NPQ8 531 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 PRKAG2Q9UGJ0 569 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 ATP11BQ9Y2G3 1177 aa18.86■□□□□ 0.61
DNMT1-221ENST00000589538 A0A0U1RQG5 324 aaPredicted RBP18.85■□□□□ 0.61
DNMT1-221ENST00000589538 SEC24BO95487 1268 aa18.85■□□□□ 0.61
DNMT1-221ENST00000589538 FOSP01100 380 aaPredicted RBP18.85■□□□□ 0.61
DNMT1-221ENST00000589538 CCT2P78371 535 aaKnown RBP18.85■□□□□ 0.61
DNMT1-221ENST00000589538 NTRK3Q16288 839 aa18.85■□□□□ 0.61
DNMT1-221ENST00000589538 PCNX4Q63HM2 1172 aa18.85■□□□□ 0.61
DNMT1-221ENST00000589538 MCTP2Q6DN12 878 aa18.85■□□□□ 0.61
DNMT1-221ENST00000589538 A6NJR5 290 aa18.84■□□□□ 0.61
DNMT1-221ENST00000589538 CDKL5O76039 1030 aa18.84■□□□□ 0.61
DNMT1-221ENST00000589538 ARIH2O95376 493 aa18.84■□□□□ 0.61
DNMT1-221ENST00000589538 LY6KQ17RY6 165 aa18.84■□□□□ 0.61
DNMT1-221ENST00000589538 TRIM60Q495X7 471 aa18.84■□□□□ 0.61
DNMT1-221ENST00000589538 ANKRD33Q7Z3H0 272 aa18.84■□□□□ 0.61
DNMT1-221ENST00000589538 IL31RAQ8NI17 732 aa18.84■□□□□ 0.61
DNMT1-221ENST00000589538 TOX2Q96NM4 488 aa18.84■□□□□ 0.61
DNMT1-221ENST00000589538 SLC26A6Q9BXS9 759 aa18.84■□□□□ 0.61
DNMT1-221ENST00000589538 NCOA5Q9HCD5 579 aaKnown RBP18.84■□□□□ 0.61
DNMT1-221ENST00000589538 DDX41Q9UJV9 622 aaKnown RBP18.84■□□□□ 0.61
DNMT1-221ENST00000589538 ESYT2A0FGR8 921 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 SMCO2A6NFE2 343 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 IRX5P78411 483 aaPredicted RBP18.83■□□□□ 0.6
DNMT1-221ENST00000589538 SSRP1Q08945 709 aaKnown RBP18.83■□□□□ 0.6
DNMT1-221ENST00000589538 AP3B2Q13367 1082 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 LAMC2Q13753 1193 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 UBE2SQ16763 222 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 TMEM63BQ5T3F8 832 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 FAM177A1Q8N128 213 aaPredicted RBP18.83■□□□□ 0.6
DNMT1-221ENST00000589538 CCDC148Q8NFR7 591 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 PHKBQ93100 1093 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 EMID1Q96A84 441 aaPredicted RBP18.83■□□□□ 0.6
DNMT1-221ENST00000589538 INPP4AQ96PE3 977 aaPredicted RBP18.83■□□□□ 0.6
DNMT1-221ENST00000589538 SLKQ9H2G2 1235 aaPredicted RBP18.83■□□□□ 0.6
DNMT1-221ENST00000589538 PCDHA6Q9UN73 950 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 PCDHA8Q9Y5H6 950 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 CEP290O15078 2479 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 DNAH12Q6ZR08 3092 aa18.83■□□□□ 0.6
DNMT1-221ENST00000589538 DCDC2CA8MYV0 355 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 ARVCFO00192 962 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 GNA11P29992 359 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 ICAM3P32942 547 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 NEK4P51957 841 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 MRPS9P82933 396 aaKnown RBP18.82■□□□□ 0.6
DNMT1-221ENST00000589538 TLE2Q04725 743 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 ARHGAP1Q07960 439 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 PKN1Q16512 942 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 TYW1BQ6NUM6 668 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 CXCL17Q6UXB2 119 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 NLRX1Q86UT6 975 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 DHX37Q8IY37 1157 aaKnown RBP18.82■□□□□ 0.6
DNMT1-221ENST00000589538 BICD2Q8TD16 824 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 COPS5Q92905 334 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 CDHR1Q96JP9 859 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 MTG1Q9BT17 334 aaPredicted RBP18.82■□□□□ 0.6
DNMT1-221ENST00000589538 UPF2Q9HAU5 1272 aaKnown RBP18.82■□□□□ 0.6
DNMT1-221ENST00000589538 C6orf50Q9HD87 102 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 SH3GLB2Q9NR46 395 aa18.82■□□□□ 0.6
DNMT1-221ENST00000589538 ZMYND8Q9ULU4 1186 aaPredicted RBP18.82■□□□□ 0.6
DNMT1-221ENST00000589538 TLR3O15455 904 aaKnown RBP18.81■□□□□ 0.6
DNMT1-221ENST00000589538 FIBPO43427 364 aa18.81■□□□□ 0.6
DNMT1-221ENST00000589538 PFKFB2O60825 505 aa18.81■□□□□ 0.6
DNMT1-221ENST00000589538 RGS20O76081 388 aa18.81■□□□□ 0.6
DNMT1-221ENST00000589538 DEXIO95424 95 aa18.81■□□□□ 0.6
DNMT1-221ENST00000589538 CDK7P50613 346 aa18.81■□□□□ 0.6
DNMT1-221ENST00000589538 AK2P54819 239 aa18.81■□□□□ 0.6
DNMT1-221ENST00000589538 STK3Q13188 491 aa18.81■□□□□ 0.6
DNMT1-221ENST00000589538 PPTC7Q8NI37 304 aa18.81■□□□□ 0.6
DNMT1-221ENST00000589538 LARP6Q9BRS8 491 aaKnown RBP18.81■□□□□ 0.6
DNMT1-221ENST00000589538 ZMYND12Q9H0C1 365 aa18.81■□□□□ 0.6
DNMT1-221ENST00000589538 PQBP1O60828 265 aaKnown RBP18.8■□□□□ 0.6
DNMT1-221ENST00000589538 MYL3P08590 195 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 CLTBP09497 229 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 PTGS1P23219 599 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 PURAQ00577 322 aaKnown RBP18.8■□□□□ 0.6
DNMT1-221ENST00000589538 ITGA7Q13683 1181 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 NEDD9Q14511 834 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 DGKDQ16760 1214 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms