RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CCDC51Q96ER9 411 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 PNMA5Q96PV4 448 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 MED15Q96RN5 788 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
VPS25-203ENST00000589520 NAA15Q9BXJ9 866 aaKnown RBP11.63□□□□□ -0.55
VPS25-203ENST00000589520 KIAA1683Q9H0B3 1180 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 TMX1Q9H3N1 280 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 AS3MTQ9HBK9 375 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 BLOC1S4Q9NUP1 217 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 MAGEC2Q9UBF1 373 aaPredicted RBP11.63□□□□□ -0.55
VPS25-203ENST00000589520 ADD3Q9UEY8 706 aaKnown RBP11.63□□□□□ -0.55
VPS25-203ENST00000589520 CNOT7Q9UIV1 285 aaKnown RBP11.63□□□□□ -0.55
VPS25-203ENST00000589520 CTNND2Q9UQB3 1225 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 COL4A5P29400 1685 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 GOLGA6L9A6NEM1 432 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 ARHGAP6O43182 974 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 STX10O60499 249 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 PRKCSHP14314 528 aaPredicted RBP11.62□□□□□ -0.55
VPS25-203ENST00000589520 ZNF76P36508 570 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 CCT6AP40227 531 aaKnown RBP11.62□□□□□ -0.55
VPS25-203ENST00000589520 GMPSP49915 693 aaPredicted RBP11.62□□□□□ -0.55
VPS25-203ENST00000589520 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
VPS25-203ENST00000589520 ARMCX5Q6P1M9 558 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 PPFIBP1Q86W92 1011 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 MICALL2Q8IY33 904 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 TRMT44Q8IYL2 757 aaKnown RBP11.62□□□□□ -0.55
VPS25-203ENST00000589520 TEPSINQ96N21 525 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 ZNF341Q9BYN7 854 aa11.62□□□□□ -0.55
VPS25-203ENST00000589520 PITPNM2Q9BZ72 1349 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 FER1L6Q2WGJ9 1857 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 N4BP3O15049 544 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 ZSCAN12O43309 604 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 ICAM1P05362 532 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 PBX1P40424 430 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 STX17P56962 302 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 SETQ01105 290 aaPredicted RBP11.61□□□□□ -0.55
VPS25-203ENST00000589520 GHRHRQ02643 423 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 KIF4BQ2VIQ3 1234 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 USH1GQ495M9 461 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 TCP11X2Q5H9J9 407 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
VPS25-203ENST00000589520 KRT26Q7Z3Y9 468 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 SPICE1Q8N0Z3 855 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 CCAR2Q8N163 923 aaKnown RBP11.61□□□□□ -0.55
VPS25-203ENST00000589520 GUF1Q8N442 669 aaKnown RBP11.61□□□□□ -0.55
VPS25-203ENST00000589520 ETNPPLQ8TBG4 499 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 P2RX5Q93086 422 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 PANX2Q96RD6 677 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 FEZ1Q99689 392 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 SLF1Q9BQI6 1058 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 POLR3CQ9BUI4 534 aaPredicted RBP11.61□□□□□ -0.55
VPS25-203ENST00000589520 WDR18Q9BV38 432 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 ZNF112Q9UJU3 913 aa11.61□□□□□ -0.55
VPS25-203ENST00000589520 R3HCC1Q9Y3T6 440 aaKnown RBP11.61□□□□□ -0.55
VPS25-203ENST00000589520 A0A1W2PQC6 194 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 KCNJ18B7U540 433 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 AKR1B15C9JRZ8 316 aaPredicted RBP11.6□□□□□ -0.55
VPS25-203ENST00000589520 RPA1P27694 616 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 APLP1P51693 650 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 COPB1P53618 953 aaKnown RBP11.6□□□□□ -0.55
VPS25-203ENST00000589520 LRRC63Q05C16 580 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 KCNJ12Q14500 433 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 PTPN14Q15678 1187 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 PRR16Q569H4 304 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 NIPA1Q7RTP0 329 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 CNGA4Q8IV77 575 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 CCDC65Q8IXS2 484 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 SMYD4Q8IYR2 804 aaPredicted RBP11.6□□□□□ -0.55
VPS25-203ENST00000589520 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 PLIN2Q99541 437 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 TSG101Q99816 390 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 NUP58Q9BVL2 599 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 HACL1Q9UJ83 578 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 DNM3Q9UQ16 869 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 GDAQ9Y2T3 454 aa11.6□□□□□ -0.55
VPS25-203ENST00000589520 POTEMA6NI47 508 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 MYMKA6NI61 221 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 C19orf81C9J6K1 198 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 ZBED4O75132 1171 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 TNNT1P13805 278 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 DNM2P50570 870 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 HTRA3P83110 453 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 MCM6Q14566 821 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 KRT31Q15323 416 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 SUPT20HL1Q3ZLR7 823 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 CENPPQ6IPU0 288 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 TTI2Q6NXR4 508 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 LDHDQ86WU2 507 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 GPC2Q8N158 579 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 RETREG2Q8NC44 543 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 TRIM47Q96LD4 638 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 BAG1Q99933 345 aaPredicted RBP11.59□□□□□ -0.55
VPS25-203ENST00000589520 WDR11Q9BZH6 1224 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 TUFT1Q9NNX1 390 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 INTS13Q9NVM9 706 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 CTDP1Q9Y5B0 961 aaPredicted RBP11.59□□□□□ -0.55
VPS25-203ENST00000589520 GJA3Q9Y6H8 435 aa11.59□□□□□ -0.55
VPS25-203ENST00000589520 OPLAHO14841 1288 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 MSH4O15457 936 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 CFBP00751 764 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms