RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 JMJD4Q9H9V9 463 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 MRVI1Q9Y6F6 885 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 ZNF286BP0CG31 522 aa15.96■□□□□ 0.15
HDAC5-208ENST00000588419 RFC2P35250 354 aa15.96■□□□□ 0.15
HDAC5-208ENST00000588419 NT5C2P49902 561 aa15.96■□□□□ 0.15
HDAC5-208ENST00000588419 PTPN11Q06124 597 aaPredicted RBP15.96■□□□□ 0.15
HDAC5-208ENST00000588419 ARHGAP1Q07960 439 aa15.96■□□□□ 0.15
HDAC5-208ENST00000588419 SKIV2LQ15477 1246 aaKnown RBP15.96■□□□□ 0.15
HDAC5-208ENST00000588419 CCDC155Q8N6L0 562 aa15.96■□□□□ 0.15
HDAC5-208ENST00000588419 AMNQ9BXJ7 453 aa15.96■□□□□ 0.15
HDAC5-208ENST00000588419 PXMP2Q9NR77 195 aa15.96■□□□□ 0.15
HDAC5-208ENST00000588419 RBAK-RBAKDNI3L0D1 243 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 RFXAPO00287 272 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 CASTP20810 708 aaKnown RBP15.95■□□□□ 0.14
HDAC5-208ENST00000588419 KCNJ6P48051 423 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 TRDNQ13061 729 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 GDF6Q6KF10 455 aaPredicted RBP15.95■□□□□ 0.14
HDAC5-208ENST00000588419 CCDC62Q6P9F0 684 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 CYB5R4Q7L1T6 521 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 ANKS1AQ92625 1134 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 IWS1Q96ST2 819 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 SLC9A7Q96T83 725 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 MICAL3Q7RTP6 2002 aa15.95■□□□□ 0.14
HDAC5-208ENST00000588419 SIP14410 1827 aa15.94■□□□□ 0.14
HDAC5-208ENST00000588419 KAT6AQ92794 2004 aa15.94■□□□□ 0.14
HDAC5-208ENST00000588419 KLRF2D3W0D1 207 aa15.94■□□□□ 0.14
HDAC5-208ENST00000588419 HOXA13P31271 388 aaPredicted RBP15.94■□□□□ 0.14
HDAC5-208ENST00000588419 DGKDQ16760 1214 aa15.94■□□□□ 0.14
HDAC5-208ENST00000588419 C7orf31Q8N865 590 aa15.94■□□□□ 0.14
HDAC5-208ENST00000588419 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
HDAC5-208ENST00000588419 ARNTL2Q8WYA1 636 aa15.94■□□□□ 0.14
HDAC5-208ENST00000588419 ZFP91Q96JP5 570 aaPredicted RBP15.94■□□□□ 0.14
HDAC5-208ENST00000588419 PRRC2BQ5JSZ5 2229 aaKnown RBP15.94■□□□□ 0.14
HDAC5-208ENST00000588419 ERICH2A1L162 156 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 NR3C2P08235 984 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 GSPT1P15170 499 aaKnown RBP15.93■□□□□ 0.14
HDAC5-208ENST00000588419 PSEN2P49810 448 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 MFSD10Q14728 455 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 TTC22Q5TAA0 569 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 LRRC8DQ7L1W4 858 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 TMCO2Q7Z6W1 182 aaPredicted RBP15.93■□□□□ 0.14
HDAC5-208ENST00000588419 DHX37Q8IY37 1157 aaKnown RBP15.93■□□□□ 0.14
HDAC5-208ENST00000588419 CAGE1Q8TC20 777 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 ATXN2LQ8WWM7 1075 aaKnown RBP15.93■□□□□ 0.14
HDAC5-208ENST00000588419 KAT2BQ92831 832 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 KATNAL1Q9BW62 490 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 TSPYL2Q9H2G4 693 aaPredicted RBP15.93■□□□□ 0.14
HDAC5-208ENST00000588419 HDAC6Q9UBN7 1215 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 MAD2L2Q9UI95 211 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 DDX41Q9UJV9 622 aaKnown RBP15.93■□□□□ 0.14
HDAC5-208ENST00000588419 PCDHA1Q9Y5I3 950 aa15.93■□□□□ 0.14
HDAC5-208ENST00000588419 KIF28PB7ZC32 967 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 TNFRSF10AO00220 468 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 IFIT3O14879 490 aaKnown RBP15.92■□□□□ 0.14
HDAC5-208ENST00000588419 ZBTB5O15062 677 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 GTPBP6O43824 516 aaPredicted RBP15.92■□□□□ 0.14
HDAC5-208ENST00000588419 PPP1R11O60927 126 aaPredicted RBP15.92■□□□□ 0.14
HDAC5-208ENST00000588419 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
HDAC5-208ENST00000588419 PDE4AP27815 886 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 IRX6P78412 446 aaPredicted RBP15.92■□□□□ 0.14
HDAC5-208ENST00000588419 MRPS5P82675 430 aaKnown RBP15.92■□□□□ 0.14
HDAC5-208ENST00000588419 SEC23AQ15436 765 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 RALYLQ86SE5 291 aaKnown RBP15.92■□□□□ 0.14
HDAC5-208ENST00000588419 FCHSD1Q86WN1 690 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 HERC6Q8IVU3 1022 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 ADAMTS19Q8TE59 1207 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 AFAP1L1Q8TED9 768 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 ASB2Q96Q27 587 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 PIGSQ96S52 555 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 GTF2IRD1Q9UHL9 959 aa15.92■□□□□ 0.14
HDAC5-208ENST00000588419 SPTBN5Q9NRC6 3674 aaKnown RBP15.92■□□□□ 0.14
HDAC5-208ENST00000588419 NLRC5Q86WI3 1866 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 EPOPA6NHQ4 379 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 OPLAHO14841 1288 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 TLL1O43897 1013 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 ARHGEF15O94989 841 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 SELPP16109 830 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 HSD17B4P51659 736 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 KIAA0753Q2KHM9 967 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 KRT40Q6A162 431 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 IL31RAQ8NI17 732 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 DHX38Q92620 1227 aaKnown RBP15.91■□□□□ 0.14
HDAC5-208ENST00000588419 SPATA33Q96N06 139 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 PDCD2LQ9BRP1 358 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 ZBED2Q9BTP6 218 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 CHD9Q3L8U1 2897 aa15.91■□□□□ 0.14
HDAC5-208ENST00000588419 BAIAP3O94812 1187 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 GGPS1O95749 300 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 WDR5P61964 334 aaKnown RBP15.9■□□□□ 0.14
HDAC5-208ENST00000588419 ZNF200P98182 395 aaPredicted RBP15.9■□□□□ 0.14
HDAC5-208ENST00000588419 PTH1RQ03431 593 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 LAMC2Q13753 1193 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 GRM4Q14833 912 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 WTAPQ15007 396 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 PGM5Q15124 567 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 FAM117BQ6P1L5 589 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 SESTD1Q86VW0 696 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 PPTC7Q8NI37 304 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 RUFY2Q8WXA3 655 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms