RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 CUL5Q93034 780 aa26.94■■□□□ 1.9
LSM7-204ENST00000587502 EMID1Q96A84 441 aaPredicted RBP26.94■■□□□ 1.9
LSM7-204ENST00000587502 ALDH8A1Q9H2A2 487 aaPredicted RBP26.94■■□□□ 1.9
LSM7-204ENST00000587502 EXOSC10Q01780 885 aaKnown RBP26.93■■□□□ 1.9
LSM7-204ENST00000587502 LAMC2Q13753 1193 aa26.93■■□□□ 1.9
LSM7-204ENST00000587502 NFRKBQ6P4R8 1299 aa26.93■■□□□ 1.9
LSM7-204ENST00000587502 DEFB123Q8N688 67 aa26.93■■□□□ 1.9
LSM7-204ENST00000587502 HIPK3Q9H422 1215 aa26.93■■□□□ 1.9
LSM7-204ENST00000587502 B4GALT4O60513 344 aa26.92■■□□□ 1.9
LSM7-204ENST00000587502 STAM2O75886 525 aa26.92■■□□□ 1.9
LSM7-204ENST00000587502 PLEKHA8P1O95397 391 aa26.92■■□□□ 1.9
LSM7-204ENST00000587502 TGFB3P10600 412 aa26.92■■□□□ 1.9
LSM7-204ENST00000587502 PTPN11Q06124 597 aaPredicted RBP26.92■■□□□ 1.9
LSM7-204ENST00000587502 ARHGAP1Q07960 439 aa26.92■■□□□ 1.9
LSM7-204ENST00000587502 COL9A3Q14050 684 aaPredicted RBP26.92■■□□□ 1.9
LSM7-204ENST00000587502 FAM109BQ6ICB4 259 aaPredicted RBP26.92■■□□□ 1.9
LSM7-204ENST00000587502 RASEFQ8IZ41 740 aa26.92■■□□□ 1.9
LSM7-204ENST00000587502 AFG1LQ8WV93 481 aa26.92■■□□□ 1.9
LSM7-204ENST00000587502 RNPC3Q96LT9 517 aaKnown RBP26.92■■□□□ 1.9
LSM7-204ENST00000587502 PPP1R12CQ9BZL4 782 aa26.92■■□□□ 1.9
LSM7-204ENST00000587502 TRPV6Q9H1D0 765 aa26.92■■□□□ 1.9
LSM7-204ENST00000587502 RBM28Q9NW13 759 aaKnown RBP26.92■■□□□ 1.9
LSM7-204ENST00000587502 REC8O95072 547 aa26.91■■□□□ 1.9
LSM7-204ENST00000587502 MMP3P08254 477 aa26.91■■□□□ 1.9
LSM7-204ENST00000587502 RXRAP19793 462 aa26.91■■□□□ 1.9
LSM7-204ENST00000587502 CASTP20810 708 aaKnown RBP26.91■■□□□ 1.9
LSM7-204ENST00000587502 EPHB4P54760 987 aa26.91■■□□□ 1.9
LSM7-204ENST00000587502 DGKDQ16760 1214 aa26.91■■□□□ 1.9
LSM7-204ENST00000587502 NBPF20Q3BBV1 942 aa26.91■■□□□ 1.9
LSM7-204ENST00000587502 TMTC3Q6ZXV5 915 aa26.91■■□□□ 1.9
LSM7-204ENST00000587502 MICU3Q86XE3 530 aa26.91■■□□□ 1.9
LSM7-204ENST00000587502 SCN10AQ9Y5Y9 1956 aa26.9■■□□□ 1.9
LSM7-204ENST00000587502 PIK3CDO00329 1044 aa26.9■■□□□ 1.9
LSM7-204ENST00000587502 SMAD3P84022 425 aaKnown RBP26.9■■□□□ 1.9
LSM7-204ENST00000587502 DHX37Q8IY37 1157 aaKnown RBP26.9■■□□□ 1.9
LSM7-204ENST00000587502 SMARCC2Q8TAQ2 1214 aa26.9■■□□□ 1.9
LSM7-204ENST00000587502 KCNB2Q92953 911 aa26.9■■□□□ 1.9
LSM7-204ENST00000587502 FRMPD4Q14CM0 1322 aa26.9■■□□□ 1.9
LSM7-204ENST00000587502 ADCK5Q3MIX3 580 aa26.89■■□□□ 1.9
LSM7-204ENST00000587502 GNPTABQ3T906 1256 aa26.89■■□□□ 1.9
LSM7-204ENST00000587502 PSRC1Q6PGN9 363 aaPredicted RBP26.89■■□□□ 1.9
LSM7-204ENST00000587502 APOA5Q6Q788 366 aa26.89■■□□□ 1.9
LSM7-204ENST00000587502 PPTC7Q8NI37 304 aa26.89■■□□□ 1.9
LSM7-204ENST00000587502 NOC4LQ9BVI4 516 aaKnown RBP26.89■■□□□ 1.9
LSM7-204ENST00000587502 ZBTB43O43298 467 aa26.88■■□□□ 1.89
LSM7-204ENST00000587502 RGS20O76081 388 aa26.88■■□□□ 1.89
LSM7-204ENST00000587502 CSF2RAP15509 400 aa26.88■■□□□ 1.89
LSM7-204ENST00000587502 CYP2C18P33260 490 aa26.88■■□□□ 1.89
LSM7-204ENST00000587502 FGD1P98174 961 aa26.88■■□□□ 1.89
LSM7-204ENST00000587502 FAM47CQ5HY64 1035 aa26.88■■□□□ 1.89
LSM7-204ENST00000587502 XRRA1Q6P2D8 792 aa26.88■■□□□ 1.89
LSM7-204ENST00000587502 CMTR1Q8N1G2 835 aaKnown RBP26.88■■□□□ 1.89
LSM7-204ENST00000587502 HSPA4P34932 840 aa26.87■■□□□ 1.89
LSM7-204ENST00000587502 RCAN1P53805 252 aa26.87■■□□□ 1.89
LSM7-204ENST00000587502 RAB11FIP4Q86YS3 637 aa26.87■■□□□ 1.89
LSM7-204ENST00000587502 IL31RAQ8NI17 732 aa26.87■■□□□ 1.89
LSM7-204ENST00000587502 KATNAL1Q9BW62 490 aa26.87■■□□□ 1.89
LSM7-204ENST00000587502 PSTPIP2Q9H939 334 aa26.87■■□□□ 1.89
LSM7-204ENST00000587502 IL23AQ9NPF7 189 aa26.87■■□□□ 1.89
LSM7-204ENST00000587502 TRMT13Q9NUP7 481 aaKnown RBP26.87■■□□□ 1.89
LSM7-204ENST00000587502 EPB41L2O43491 1005 aaKnown RBP26.86■■□□□ 1.89
LSM7-204ENST00000587502 RTN1Q16799 776 aa26.86■■□□□ 1.89
LSM7-204ENST00000587502 CELF3Q5SZQ8 465 aaKnown RBP26.86■■□□□ 1.89
LSM7-204ENST00000587502 CCDC82Q8N4S0 544 aa26.86■■□□□ 1.89
LSM7-204ENST00000587502 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.86■■□□□ 1.898e-8■■□□□ 12
LSM7-204ENST00000587502 MEIS2O14770 477 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 PPFIA4O75335 1185 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 TMEM240Q5SV17 173 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 ZNF697Q5TEC3 545 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 MYSM1Q5VVJ2 828 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 USP17L6PQ6QN14 398 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 Q7L0L9 218 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 SESTD1Q86VW0 696 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 TEX2Q8IWB9 1127 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 RPUSD2Q8IZ73 545 aaKnown RBP26.85■■□□□ 1.89
LSM7-204ENST00000587502 TCEANC2Q96MN5 208 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 MTIF3Q9H2K0 278 aaKnown RBP26.85■■□□□ 1.89
LSM7-204ENST00000587502 MTMR10Q9NXD2 777 aa26.85■■□□□ 1.89
LSM7-204ENST00000587502 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.84■■□□□ 1.89
LSM7-204ENST00000587502 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.84■■□□□ 1.89
LSM7-204ENST00000587502 GGPS1O95749 300 aa26.84■■□□□ 1.89
LSM7-204ENST00000587502 ICAM3P32942 547 aa26.84■■□□□ 1.89
LSM7-204ENST00000587502 PCNX4Q63HM2 1172 aa26.84■■□□□ 1.89
LSM7-204ENST00000587502 C16orf59Q7L2K0 433 aa26.84■■□□□ 1.89
LSM7-204ENST00000587502 SPATA33Q96N06 139 aa26.84■■□□□ 1.89
LSM7-204ENST00000587502 INPP4AQ96PE3 977 aaPredicted RBP26.84■■□□□ 1.89
LSM7-204ENST00000587502 MLXIPQ9HAP2 919 aa26.84■■□□□ 1.89
LSM7-204ENST00000587502 BRPF3Q9ULD4 1205 aa26.84■■□□□ 1.89
LSM7-204ENST00000587502 NOD1Q9Y239 953 aa26.84■■□□□ 1.89
LSM7-204ENST00000587502 KLF18A0A0U1RQI7 1052 aa26.83■■□□□ 1.89
LSM7-204ENST00000587502 HOXD8P13378 290 aaPredicted RBP26.83■■□□□ 1.89
LSM7-204ENST00000587502 PSMA5P28066 241 aa26.83■■□□□ 1.89
LSM7-204ENST00000587502 CCL23P55773 120 aa26.83■■□□□ 1.89
LSM7-204ENST00000587502 MRPS9P82933 396 aaKnown RBP26.83■■□□□ 1.89
LSM7-204ENST00000587502 BLOC1S2Q6QNY1 142 aa26.83■■□□□ 1.89
LSM7-204ENST00000587502 JAKMIP1Q96N16 626 aaKnown RBP26.83■■□□□ 1.89
LSM7-204ENST00000587502 CCDC196A0A1B0GTZ2 297 aa26.82■■□□□ 1.88
LSM7-204ENST00000587502 GOLGA8AA7E2F4 631 aa26.82■■□□□ 1.88
LSM7-204ENST00000587502 GOLGA8BA8MQT2 603 aa26.82■■□□□ 1.88
LSM7-204ENST00000587502 CYP2C9P11712 490 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms