RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 NEBLO76041 1014 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 CT47B1P0C2W7 299 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-203ENST00000585448 GOLGA6DP0CG33 693 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 ELF1P32519 619 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 CD96P40200 585 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 ZNF143P52747 638 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-203ENST00000585448 EIF5P55010 431 aaKnown RBP7.03□□□□□ -1.28
SMAD4-203ENST00000585448 CCT2P78371 535 aaKnown RBP7.03□□□□□ -1.28
SMAD4-203ENST00000585448 PLCL1Q15111 1095 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 SF3A1Q15459 793 aaKnown RBP7.03□□□□□ -1.28
SMAD4-203ENST00000585448 AMOTQ4VCS5 1084 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 GBP6Q6ZN66 633 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 SNRNP27Q8WVK2 155 aaKnown RBP7.03□□□□□ -1.28
SMAD4-203ENST00000585448 TCP11Q8WWU5 503 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 KLHL6Q8WZ60 621 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 ANAPC16Q96DE5 110 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 DDX11Q96FC9 970 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 ZNF512BQ96KM6 892 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-203ENST00000585448 EIF3CQ99613 913 aaKnown RBP7.03□□□□□ -1.28
SMAD4-203ENST00000585448 TRIM6Q9C030 488 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-203ENST00000585448 ZNF408Q9H9D4 720 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 GOLGA6AQ9NYA3 693 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 LCMT1Q9UIC8 334 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 DUSP13Q9UII6 198 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 CCDC18Q5T9S5 1454 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 CAND2O75155 1236 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 CDKL5O76039 1030 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 TUBB4AP04350 444 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 RBM5P52756 815 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMAD4-203ENST00000585448 SLC7A5Q01650 507 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 SNW1Q13573 536 aaKnown RBP7.02□□□□□ -1.29
SMAD4-203ENST00000585448 SLC5A9Q2M3M2 681 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 ZNF792Q3KQV3 632 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 RNF111Q6ZNA4 994 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 TRIM74Q86UV6 250 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 TRIM73Q86UV7 250 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 RBM12BQ8IXT5 1001 aaKnown RBP7.02□□□□□ -1.29
SMAD4-203ENST00000585448 CCDC144CPQ8IYA2 1237 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 DRAXINQ8NBI3 349 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-203ENST00000585448 LINC00116Q8NCU8 138 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 NEK11Q8NG66 645 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 MMTAG2Q9BU76 263 aaKnown RBP7.02□□□□□ -1.29
SMAD4-203ENST00000585448 CARS2Q9HA77 564 aaKnown RBP7.02□□□□□ -1.29
SMAD4-203ENST00000585448 MBNL3Q9NUK0 354 aaKnown RBP7.02□□□□□ -1.29
SMAD4-203ENST00000585448 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-203ENST00000585448 ARAP1Q96P48 1450 aa7.02□□□□□ -1.29
SMAD4-203ENST00000585448 ELP1O95163 1332 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 BLMP54132 1417 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-203ENST00000585448 SCAF11Q99590 1463 aaKnown RBP7.01□□□□□ -1.29
SMAD4-203ENST00000585448 CBFA2T2O43439 604 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 SNUPNO95149 360 aaKnown RBP7.01□□□□□ -1.29
SMAD4-203ENST00000585448 PRAMEF1O95521 474 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 RNASE1P07998 156 aaKnown RBP7.01□□□□□ -1.29
SMAD4-203ENST00000585448 H2AFXP16104 143 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-203ENST00000585448 CD247P20963 164 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 ENDOUP21128 410 aaKnown RBP7.01□□□□□ -1.29
SMAD4-203ENST00000585448 ETFBP38117 255 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 RPS6KA3P51812 740 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 MNAT1P51948 309 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 CLEC16AQ2KHT3 1053 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 NAIF1Q69YI7 327 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-203ENST00000585448 TMC3Q7Z5M5 1100 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 KIAA1328Q86T90 577 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 TADA2BQ86TJ2 420 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 ANKRD18AQ8IVF6 992 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 FAM177A1Q8N128 213 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-203ENST00000585448 FLAD1Q8NFF5 587 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 PI4K2BQ8TCG2 481 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 ALPK1Q96QP1 1244 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 UBXN6Q9BZV1 441 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 UBA5Q9GZZ9 404 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 IQCGQ9H095 443 aaKnown RBP7.01□□□□□ -1.29
SMAD4-203ENST00000585448 CHST7Q9NS84 486 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 ACTR10Q9NZ32 417 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 CLIP2Q9UDT6 1046 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 ADAMTS6Q9UKP5 1117 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 FHOD1Q9Y613 1164 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 SPATA31E1Q6ZUB1 1445 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 CCDC171Q6TFL3 1326 aa7.01□□□□□ -1.29
SMAD4-203ENST00000585448 A0A1B0GUA9 196 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 RBAK-RBAKDNI3L0D1 243 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 SMAD7O15105 426 aaKnown RBP7□□□□□ -1.29
SMAD4-203ENST00000585448 ZRANB2O95218 330 aaKnown RBP eCLIP7□□□□□ -1.29
SMAD4-203ENST00000585448 SLU7O95391 586 aaKnown RBP7□□□□□ -1.29
SMAD4-203ENST00000585448 MYBL2P10244 700 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 BMP8BP34820 402 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 DDR1Q08345 913 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 PDIA5Q14554 519 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 NCAPHQ15003 741 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 PPP2R5EQ16537 467 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 TTC19Q6DKK2 380 aaPredicted RBP7□□□□□ -1.29
SMAD4-203ENST00000585448 MCTP1Q6DN14 999 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 FBXO38Q6PIJ6 1188 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 FILIP1Q7Z7B0 1213 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 ATG4DQ86TL0 474 aaPredicted RBP7□□□□□ -1.29
SMAD4-203ENST00000585448 TCTN2Q96GX1 697 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 HAUS7Q99871 368 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 CRACR2AQ9BSW2 395 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 THUMPD2Q9BTF0 503 aaKnown RBP7□□□□□ -1.29
SMAD4-203ENST00000585448 KLHL25Q9H0H3 589 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms