RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 CCDC148Q8NFR7 591 aa18.31■□□□□ 0.52
CSNK1D-223ENST00000584472 CCDC12Q8WUD4 166 aaPredicted RBP18.31■□□□□ 0.52
CSNK1D-223ENST00000584472 TAAR1Q96RJ0 339 aa18.31■□□□□ 0.52
CSNK1D-223ENST00000584472 XPNPEP3Q9NQH7 507 aa18.31■□□□□ 0.52
CSNK1D-223ENST00000584472 DDX49Q9Y6V7 483 aaKnown RBP18.31■□□□□ 0.52
CSNK1D-223ENST00000584472 ESYT2A0FGR8 921 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 HOXA13P31271 388 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 C1orf53Q5VUE5 145 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 ARHGEF16Q5VV41 709 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 ANO1Q5XXA6 986 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 TAPT1Q6NXT6 567 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 FBXO16Q8IX29 292 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 C7orf61Q8IZ16 206 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 CUL5Q93034 780 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 C8orf76Q96K31 380 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 ZMYND12Q9H0C1 365 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 PSTPIP2Q9H939 334 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 PXMP2Q9NR77 195 aa18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-223ENST00000584472 FRMPD4Q14CM0 1322 aa18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 RBM47A0AV96 593 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 SMCO2A6NFE2 343 aa18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 FOSBP53539 338 aa18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 TRIM29Q14134 588 aa18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 LARP1BQ659C4 914 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 IQSEC1Q6DN90 963 aa18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 FBXO18Q8NFZ0 1043 aa18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 IPO9Q96P70 1041 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 PHF20Q9BVI0 1012 aa18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 KCNJ14Q9UNX9 436 aa18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 SZT2Q5T011 3432 aa18.29■□□□□ 0.52
CSNK1D-223ENST00000584472 SYNRGQ9UMZ2 1314 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 KBTBD13C9JR72 458 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 MEIS2O14770 477 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 ADCY6O43306 1168 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 EIF2AK2P19525 551 aaKnown RBP18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 PDCP20941 246 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 NLRP5P59047 1200 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 TNFAIP2Q03169 654 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 SNX17Q15036 470 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 LRRC41Q15345 812 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 STXBP2Q15833 593 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 LRRC26Q2I0M4 334 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 KRT40Q6A162 431 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 EEPD1Q7L9B9 569 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 RNF180Q86T96 592 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 SCFD2Q8WU76 684 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 PDCD2LQ9BRP1 358 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 GLT8D2Q9H1C3 349 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 UPF3AQ9H1J1 476 aaKnown RBP18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 RIC8AQ9NPQ8 531 aa18.28■□□□□ 0.52
CSNK1D-223ENST00000584472 ADAMTS4O75173 837 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 EIF3JO75822 258 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 MMP1P03956 469 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 NR3C2P08235 984 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 GNA11P29992 359 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 ADCYAP1R1P41586 468 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 ADCY7P51828 1080 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 NKX3-2P78367 333 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 GUCY1B3Q02153 619 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 NPY5RQ15761 445 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 GALNT17Q6IS24 598 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 FCHSD1Q86WN1 690 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 LENG1Q96BZ8 264 aaPredicted RBP18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 SPC25Q9HBM1 224 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 C6orf50Q9HD87 102 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 PDGFCQ9NRA1 345 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 PCDHA4Q9UN74 947 aa18.27■□□□□ 0.52
CSNK1D-223ENST00000584472 KIAA1217Q5T5P2 1943 aa18.27■□□□□ 0.51
CSNK1D-223ENST00000584472 ADAMTS3O15072 1205 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 PGK1P00558 417 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 SYT1P21579 422 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 CST5P28325 142 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 GJA9P57773 515 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 DUSP28Q4G0W2 176 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 GJC2Q5T442 439 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 GPR153Q6NV75 609 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 USP17L6PQ6QN14 398 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 VSIG10LQ86VR7 867 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 DAGLBQ8NCG7 672 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 TSEN34Q9BSV6 310 aaKnown RBP18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 WDR11Q9BZH6 1224 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 SENP6Q9GZR1 1112 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 GNEQ9Y223 722 aaKnown RBP18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 Q9Y3F1 56 aa18.26■□□□□ 0.51
CSNK1D-223ENST00000584472 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 H3BQV1 296 aa18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 SMPD1P17405 629 aa18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 CCND2P30279 289 aa18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 CLK2P49760 499 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 PGM5Q15124 567 aa18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 XRRA1Q6P2D8 792 aa18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 BLIDQ8IZY5 108 aa18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 KLHDC9Q8NEP7 349 aa18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 BICD2Q8TD16 824 aa18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 PHF24Q9UPV7 400 aa18.25■□□□□ 0.51
CSNK1D-223ENST00000584472 M0R2N6 131 aa18.24■□□□□ 0.51
CSNK1D-223ENST00000584472 NKRFO15226 690 aaKnown RBP eCLIP18.24■□□□□ 0.51
CSNK1D-223ENST00000584472 STAM2O75886 525 aa18.24■□□□□ 0.51
CSNK1D-223ENST00000584472 KRT2P35908 639 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms