RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CALM3P0DP25 149 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 PLCD1P51178 756 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 RAB15P59190 212 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 CTR9Q6PD62 1173 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 RPUSD2Q8IZ73 545 aaKnown RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 IGSF22Q8N9C0 903 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 RASGRP4Q8TDF6 673 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 ZBTB9Q96C00 473 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 RIOK1Q9BRS2 568 aaKnown RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 KAT14Q9H8E8 782 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 ARHGEF10LQ9HCE6 1279 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 INTS13Q9NVM9 706 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 STX8Q9UNK0 236 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 CTNND2Q9UQB3 1225 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 RPS6KL1Q9Y6S9 549 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 SYNRGQ9UMZ2 1314 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 FAM237AA0A1B0GTK4 181 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 CCDC194A0A1B0GVG4 234 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 WNT7AO00755 349 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 PRPF3O43395 683 aaKnown RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 ZSCAN20P17040 1043 aaPredicted RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 MORC3Q14149 939 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 TCEAL1Q15170 157 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 PPP2R5BQ15173 497 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 PKN1Q16512 942 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 FAM182BQ5T319 152 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 TOGARAM2Q6ZUX3 1019 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 KRT222Q8N1A0 295 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 CCDC12Q8WUD4 166 aaPredicted RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 PAGE5Q96GU1 130 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 VPS16Q9H269 839 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 BSDC1Q9NW68 430 aaPredicted RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 ARGLU1Q9NWB6 273 aaPredicted RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 A0A087X0B3 334 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 AKR1B15C9JRZ8 316 aaPredicted RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 SLFN14P0C7P3 912 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 TFAP4Q01664 338 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 MTF1Q14872 753 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 TBC1D9BQ66K14 1250 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 TMTC3Q6ZXV5 915 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 AMOTL1Q8IY63 956 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 SRBD1Q8N5C6 995 aaKnown RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 IQUBQ8NA54 791 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 ANKRD20A12PQ8NF67 263 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 CSRNP1Q96S65 589 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 NOL10Q9BSC4 688 aaKnown RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 EPC1Q9H2F5 836 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 KCNMB2Q9Y691 235 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 NDUFB5O43674 189 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 BMP15O95972 392 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 SCG2P13521 617 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 VEGFAP15692 232 aaPredicted RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 KIF5BP33176 963 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 PSMA6P60900 246 aaKnown RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 TROAPQ12815 778 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 TMCO3Q6UWJ1 677 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 HEATR3Q7Z4Q2 680 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 APBB1IPQ7Z5R6 666 aaPredicted RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 TRIML1Q8N9V2 468 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 PMM1Q92871 262 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 FERMT2Q96AC1 680 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 DYNLL2Q96FJ2 89 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 PHF20Q9BVI0 1012 aa6.03□□□□□ -1.44
VAPA-203ENST00000577539 DCP1AQ9NPI6 582 aaPredicted RBP6.03□□□□□ -1.44
VAPA-203ENST00000577539 SPATA31A1Q5TZJ5 1347 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 AKAP11Q9UKA4 1901 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 MZF1P28698 734 aaPredicted RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 MAPK8P45983 427 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 CTC1Q2NKJ3 1217 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 SPATA1Q5VX52 437 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 XKR5Q6UX68 686 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 ZNF444Q8N0Y2 327 aaPredicted RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 TC2NQ8N9U0 490 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 LINC00116Q8NCU8 138 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 NSUN4Q96CB9 384 aaKnown RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 CRELD1Q96HD1 420 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 GPR101Q96P66 508 aaPredicted RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 WDR24Q96S15 920 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 BRIP1Q9BX63 1249 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 IRX2Q9BZI1 471 aaPredicted RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 VAT1LQ9HCJ6 419 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 TAB2Q9NYJ8 693 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 PRKAG2Q9UGJ0 569 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 SAP30BPQ9UHR5 308 aaKnown RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 UBR2Q8IWV8 1755 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 EIF1AYO14602 144 aaKnown RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 MYO1BO43795 1136 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 STX10O60499 249 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 CCDC175P0C221 793 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 STAT6P42226 847 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 DMTNQ08495 405 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 TPTE2Q6XPS3 522 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 REXO1L1PQ8IX06 675 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 CNKSR1Q969H4 720 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 SHISA4Q96DD7 197 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 EEF2KMTQ96G04 330 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 NGLY1Q96IV0 654 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 NUP88Q99567 741 aaPredicted RBP6.02□□□□□ -1.45
VAPA-203ENST00000577539 MTA3Q9BTC8 594 aa6.02□□□□□ -1.45
VAPA-203ENST00000577539 FAN1Q9Y2M0 1017 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms