RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 ACTR10Q9NZ32 417 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 MAPK8IP1Q9UQF2 711 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 SOS1Q07889 1333 aaPredicted RBP6.25□□□□□ -1.41
PRPF8-211ENST00000574728 A0A1W2PQH9 124 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 PRAMEF22A3QJZ6 481 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 FAM86C2PA6NEL3 165 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 CLEC3AO75596 197 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 GYS1P13807 737 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 SFRP5Q5T4F7 317 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 ARHGAP27Q6ZUM4 889 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 ANKS3Q6ZW76 656 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 SYT17Q9BSW7 474 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 LEMD3Q9Y2U8 911 aa6.25□□□□□ -1.41
PRPF8-211ENST00000574728 IGF2BP3O00425 579 aaKnown RBP eCLIP6.24□□□□□ -1.41
PRPF8-211ENST00000574728 TMPOP42166 694 aaKnown RBP6.24□□□□□ -1.41
PRPF8-211ENST00000574728 EIF5P55010 431 aaKnown RBP6.24□□□□□ -1.41
PRPF8-211ENST00000574728 RNF4P78317 190 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 PRSS36Q5K4E3 855 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 SOGA3Q5TF21 947 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 FAM214BQ7L5A3 538 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 ZDHHC13Q8IUH4 622 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 FLAD1Q8NFF5 587 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 PNISRQ8TF01 805 aaKnown RBP6.24□□□□□ -1.41
PRPF8-211ENST00000574728 RNF141Q8WVD5 230 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 KREMEN1Q96MU8 473 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 SLC6A18Q96N87 628 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 MIS18AQ9NYP9 233 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 SRP68Q9UHB9 627 aaKnown RBP6.24□□□□□ -1.41
PRPF8-211ENST00000574728 ZBTB1Q9Y2K1 713 aa6.24□□□□□ -1.41
PRPF8-211ENST00000574728 USP42Q9H9J4 1324 aaKnown RBP6.24□□□□□ -1.41
PRPF8-211ENST00000574728 BTBD11A6QL63 1104 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 TM4SF1P30408 202 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 KIR3DL1P43629 444 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 EIF4A1P60842 406 aaKnown RBP6.23□□□□□ -1.41
PRPF8-211ENST00000574728 DDR1Q08345 913 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 TEFQ10587 303 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 TAF7Q15545 349 aaPredicted RBP6.23□□□□□ -1.41
PRPF8-211ENST00000574728 ZYXQ15942 572 aaKnown RBP6.23□□□□□ -1.41
PRPF8-211ENST00000574728 BBS9Q3SYG4 887 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 C22orf34Q6ZV56 151 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 LRP10Q7Z4F1 713 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 TMEM192Q8IY95 271 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 CCDC146Q8IYE0 955 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 NLGN2Q8NFZ4 835 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 HNRNPLLQ8WVV9 542 aaKnown RBP6.23□□□□□ -1.41
PRPF8-211ENST00000574728 HEXIM2Q96MH2 286 aaKnown RBP6.23□□□□□ -1.41
PRPF8-211ENST00000574728 ASPNQ9BXN1 380 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 TNKS2Q9H2K2 1166 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 PHAXQ9H814 394 aaKnown RBP6.23□□□□□ -1.41
PRPF8-211ENST00000574728 PIM2Q9P1W9 311 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 RRP7AQ9Y3A4 280 aaKnown RBP6.23□□□□□ -1.41
PRPF8-211ENST00000574728 USP16Q9Y5T5 823 aa6.23□□□□□ -1.41
PRPF8-211ENST00000574728 VIRMAQ69YN4 1812 aaKnown RBP6.22□□□□□ -1.41
PRPF8-211ENST00000574728 C4AP0C0L4 1744 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 KDM3BQ7LBC6 1761 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 K7ELQ4 463 aaPredicted RBP6.22□□□□□ -1.41
PRPF8-211ENST00000574728 CHL1O00533 1208 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 CYP26A1O43174 497 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 CBX7O95931 251 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 A1BGP04217 495 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 ZNF853P0CG23 659 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 PMS1P54277 932 aaKnown RBP6.22□□□□□ -1.41
PRPF8-211ENST00000574728 RIPK4P57078 832 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 RBL2Q08999 1139 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 FXNQ16595 210 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 LARP1BQ659C4 914 aaKnown RBP6.22□□□□□ -1.41
PRPF8-211ENST00000574728 RUNDC1Q96C34 613 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 FMNL2Q96PY5 1086 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 TRIM55Q9BYV6 548 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 MKNK2Q9HBH9 465 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 LRRC4CQ9HCJ2 640 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 SUCOQ9UBS9 1254 aaKnown RBP6.22□□□□□ -1.41
PRPF8-211ENST00000574728 LTBP3Q9NS15 1303 aa6.22□□□□□ -1.41
PRPF8-211ENST00000574728 DLG5Q8TDM6 1919 aa6.21□□□□□ -1.41
PRPF8-211ENST00000574728 PRR19A6NJB7 356 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 KLF4O43474 513 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 MMP10P09238 476 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 FOSL1P15407 271 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 HMGB2P26583 209 aaKnown RBP6.21□□□□□ -1.42
PRPF8-211ENST00000574728 NBPF12Q5TAG4 269 aaPredicted RBP6.21□□□□□ -1.42
PRPF8-211ENST00000574728 MFSD4AQ8N468 514 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 FBXL18Q96ME1 805 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.42
PRPF8-211ENST00000574728 MKRN2Q9H000 416 aaKnown RBP6.21□□□□□ -1.42
PRPF8-211ENST00000574728 NARFQ9UHQ1 456 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 ZNF214Q9UL59 606 aaPredicted RBP6.21□□□□□ -1.42
PRPF8-211ENST00000574728 KCNH3Q9ULD8 1083 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 C10orf71Q711Q0 1435 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 KIAA1551Q9HCM1 1747 aa6.21□□□□□ -1.42
PRPF8-211ENST00000574728 COL15A1P39059 1388 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 FAM155AB1AL88 458 aaPredicted RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 POLRMTO00411 1230 aaKnown RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 APAF1O14727 1248 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 CAMTA2O94983 1202 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 SNRPA1P09661 255 aaKnown RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 ZNF865P0CJ78 1059 aaPredicted RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 YBX3P16989 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 KCNA3P22001 575 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 GRIK1P39086 918 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 IL6STP40189 918 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms