RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TTLL12Q14166 644 aaPredicted RBP31.95■■■□□ 2.7
CTDNEP1-210ENST00000574322 FAM20AQ96MK3 541 aa31.95■■■□□ 2.7
CTDNEP1-210ENST00000574322 PLIN2Q99541 437 aa31.95■■■□□ 2.7
CTDNEP1-210ENST00000574322 PPP1R9AQ9ULJ8 1098 aa31.95■■■□□ 2.7
CTDNEP1-210ENST00000574322 MARCH6O60337 910 aa31.94■■■□□ 2.7
CTDNEP1-210ENST00000574322 ZNF18P17022 549 aa31.94■■■□□ 2.7
CTDNEP1-210ENST00000574322 FANCCQ00597 558 aa31.94■■■□□ 2.7
CTDNEP1-210ENST00000574322 BLOC1S4Q9NUP1 217 aa31.94■■■□□ 2.7
CTDNEP1-210ENST00000574322 PARP14Q460N5 1801 aa31.93■■■□□ 2.7
CTDNEP1-210ENST00000574322 C19orf81C9J6K1 198 aa31.93■■■□□ 2.7
CTDNEP1-210ENST00000574322 CFBP00751 764 aa31.93■■■□□ 2.7
CTDNEP1-210ENST00000574322 DRC7Q8IY82 874 aa31.93■■■□□ 2.7
CTDNEP1-210ENST00000574322 SAMD3Q8N6K7 520 aa31.93■■■□□ 2.7
CTDNEP1-210ENST00000574322 TBC1D5Q92609 795 aa31.93■■■□□ 2.7
CTDNEP1-210ENST00000574322 GTPBP4Q9BZE4 634 aaKnown RBP31.93■■■□□ 2.7
CTDNEP1-210ENST00000574322 EHMT1Q9H9B1 1298 aa31.93■■■□□ 2.7
CTDNEP1-210ENST00000574322 FAM86B1E9PN63 330 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 RHOBTB3O94955 611 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 FAM86B2P0C5J1 330 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 HSD17B4P51659 736 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 SNX29Q8TEQ0 813 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 TRIM9Q9C026 710 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 CCPG1Q9ULG6 757 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 NFE2L3Q9Y4A8 694 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 ZNF500O60304 480 aaPredicted RBP31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 ATP1A3P13637 1013 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 SPATA1Q5VX52 437 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 CST9Q5W186 159 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 CNNM4Q6P4Q7 775 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 XPO4Q9C0E2 1151 aaKnown RBP31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 GBA2Q9HCG7 927 aaPredicted RBP31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 IFNKQ9P0W0 207 aa31.92■■■□□ 2.7
CTDNEP1-210ENST00000574322 USP2O75604 605 aaPredicted RBP31.91■■■□□ 2.7
CTDNEP1-210ENST00000574322 PRR16Q569H4 304 aa31.91■■■□□ 2.7
CTDNEP1-210ENST00000574322 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.91■■■□□ 2.73e-14■■□□□ 12.2
CTDNEP1-210ENST00000574322 CDK5RAP3Q96JB5 506 aa31.91■■■□□ 2.7
CTDNEP1-210ENST00000574322 AGBL1Q96MI9 1066 aa31.91■■■□□ 2.7
CTDNEP1-210ENST00000574322 NUDT12Q9BQG2 462 aa31.91■■■□□ 2.7
CTDNEP1-210ENST00000574322 TANGO6Q9C0B7 1094 aa31.91■■■□□ 2.7
CTDNEP1-210ENST00000574322 RPAP3Q9H6T3 665 aaPredicted RBP31.91■■■□□ 2.7
CTDNEP1-210ENST00000574322 MAP3K20Q9NYL2 800 aaKnown RBP31.91■■■□□ 2.7
CTDNEP1-210ENST00000574322 KDM3AQ9Y4C1 1321 aa31.91■■■□□ 2.7
CTDNEP1-210ENST00000574322 SPIRE1Q08AE8 756 aa31.9■■■□□ 2.7
CTDNEP1-210ENST00000574322 SV2BQ7L1I2 683 aa31.9■■■□□ 2.7
CTDNEP1-210ENST00000574322 ARMC9Q7Z3E5 817 aa31.9■■■□□ 2.7
CTDNEP1-210ENST00000574322 FCHSD1Q86WN1 690 aa31.9■■■□□ 2.7
CTDNEP1-210ENST00000574322 C2orf69Q8N8R5 385 aa31.9■■■□□ 2.7
CTDNEP1-210ENST00000574322 NT5C3AQ9H0P0 336 aa31.9■■■□□ 2.7
CTDNEP1-210ENST00000574322 RABGAP1Q9Y3P9 1069 aa31.9■■■□□ 2.7
CTDNEP1-210ENST00000574322 STK24Q9Y6E0 443 aa31.9■■■□□ 2.7
CTDNEP1-210ENST00000574322 IGLV3-22A0A075B6J6 115 aa31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 CBFA2T2O43439 604 aa31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 FLOT1O75955 427 aa31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 IREB2P48200 963 aaKnown RBP31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 KMT5BQ4FZB7 885 aa31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 MOB2Q70IA6 237 aa31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 CCDC186Q7Z3E2 898 aa31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 CLEC4DQ8WXI8 215 aa31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 LARP4BQ92615 738 aaKnown RBP31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 RAD54LQ92698 747 aa31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 ZHX2Q9Y6X8 837 aa31.89■■■□□ 2.7
CTDNEP1-210ENST00000574322 FKBP1BP68106 108 aa31.89■■■□□ 2.69
CTDNEP1-210ENST00000574322 DGKZQ13574 1117 aa31.89■■■□□ 2.69
CTDNEP1-210ENST00000574322 MCF2L2Q86YR7 1114 aa31.89■■■□□ 2.69
CTDNEP1-210ENST00000574322 LRRC27Q9C0I9 530 aa31.89■■■□□ 2.69
CTDNEP1-210ENST00000574322 IMPACTQ9P2X3 320 aa31.89■■■□□ 2.69
CTDNEP1-210ENST00000574322 GJA10Q969M2 543 aa31.88■■■□□ 2.69
CTDNEP1-210ENST00000574322 NRBP1Q9UHY1 535 aa31.88■■■□□ 2.69
CTDNEP1-210ENST00000574322 RWDD2AQ9UIY3 292 aa31.88■■■□□ 2.69
CTDNEP1-210ENST00000574322 SYNRGQ9UMZ2 1314 aa31.88■■■□□ 2.69
CTDNEP1-210ENST00000574322 PAPPA2Q9BXP8 1791 aa31.87■■■□□ 2.69
CTDNEP1-210ENST00000574322 TRMT44Q8IYL2 757 aaKnown RBP31.87■■■□□ 2.69
CTDNEP1-210ENST00000574322 SMYD4Q8IYR2 804 aaPredicted RBP31.87■■■□□ 2.69
CTDNEP1-210ENST00000574322 GIMAP8Q8ND71 665 aaPredicted RBP31.87■■■□□ 2.69
CTDNEP1-210ENST00000574322 CCDC47Q96A33 483 aaKnown RBP31.87■■■□□ 2.69
CTDNEP1-210ENST00000574322 KCNF1Q9H3M0 494 aa31.87■■■□□ 2.69
CTDNEP1-210ENST00000574322 RLFQ13129 1914 aa31.87■■■□□ 2.69
CTDNEP1-210ENST00000574322 MSH4O15457 936 aa31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 PTGS1P23219 599 aa31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 ZBED4O75132 1171 aa31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 HOXA7P31268 230 aaPredicted RBP31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 ZNF76P36508 570 aa31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 SAMD1Q6SPF0 538 aaPredicted RBP31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 ADSSL1Q8N142 457 aa31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 ZNF830Q96NB3 372 aaPredicted RBP31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 ADAMTS5Q9UNA0 930 aa31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 AFG3L2Q9Y4W6 797 aa31.86■■■□□ 2.69
CTDNEP1-210ENST00000574322 RPTORQ8N122 1335 aa31.85■■■□□ 2.69
CTDNEP1-210ENST00000574322 PVALEFA0A1B0GWK0 134 aa31.85■■■□□ 2.69
CTDNEP1-210ENST00000574322 UBASH3AP57075 661 aa31.85■■■□□ 2.69
CTDNEP1-210ENST00000574322 CCDC144BQ3MJ40 725 aa31.85■■■□□ 2.69
CTDNEP1-210ENST00000574322 COBLL1Q53SF7 1204 aa31.85■■■□□ 2.69
CTDNEP1-210ENST00000574322 VWA5AO00534 786 aa31.84■■■□□ 2.69
CTDNEP1-210ENST00000574322 SERPINC1P01008 464 aa31.84■■■□□ 2.69
CTDNEP1-210ENST00000574322 CCT6AP40227 531 aaKnown RBP31.84■■■□□ 2.69
CTDNEP1-210ENST00000574322 ECM1Q16610 540 aa31.84■■■□□ 2.69
CTDNEP1-210ENST00000574322 SH3D19Q5HYK7 790 aa31.84■■■□□ 2.69
CTDNEP1-210ENST00000574322 CDKAL1Q5VV42 579 aa31.84■■■□□ 2.69
CTDNEP1-210ENST00000574322 KLHL10Q6JEL2 608 aa31.84■■■□□ 2.69
CTDNEP1-210ENST00000574322 RBBP6Q7Z6E9 1792 aaKnown RBP31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms