RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CHMP4BP1P59074 171 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 SSRP1Q08945 709 aaKnown RBP7.32□□□□□ -1.24
SF3B3-214ENST00000572365 EGFLAMQ63HQ2 1017 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 CCDC144CPQ8IYA2 1237 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 TOP6BLQ8N6T0 577 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 THAP3Q8WTV1 239 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-214ENST00000572365 COX4I2Q96KJ9 171 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 ZNF512BQ96KM6 892 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-214ENST00000572365 KLHL25Q9H0H3 589 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 KANSL2Q9H9L4 492 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 FAM86C1Q9NVL1 165 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 MYH14Q7Z406 1995 aaKnown RBP7.31□□□□□ -1.24
SF3B3-214ENST00000572365 TTC21AQ8NDW8 1320 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 A0A0C4DFX4 3053 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 CYP27B1O15528 508 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 LEFTY1O75610 366 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 DDNO94850 711 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-214ENST00000572365 GYS1P13807 737 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 CYP7A1P22680 504 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 RFC4P35249 363 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 GATA4P43694 442 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 GSK3AP49840 483 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 SOX10P56693 466 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 KCNMA1Q12791 1236 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 TCEAL1Q15170 157 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 C2orf27AQ580R0 203 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 DCAF15Q66K64 600 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 HEATR6Q6AI08 1181 aaKnown RBP7.31□□□□□ -1.24
SF3B3-214ENST00000572365 FAM214BQ7L5A3 538 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 C7orf61Q8IZ16 206 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 ZNF513Q8N8E2 541 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-214ENST00000572365 SGSM3Q96HU1 749 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 MKRN2Q9H000 416 aaKnown RBP7.31□□□□□ -1.24
SF3B3-214ENST00000572365 C7orf69Q9H7B7 122 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 PFDN2Q9UHV9 154 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 RAXQ9Y2V3 346 aa7.31□□□□□ -1.24
SF3B3-214ENST00000572365 MAP2P11137 1827 aaKnown RBP7.31□□□□□ -1.24
SF3B3-214ENST00000572365 C10orf71Q711Q0 1435 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 HMX2A2RU54 273 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 IQCA1LA6NCM1 817 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 SHOXO15266 292 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 FAM87AP0C7U9 286 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 HOXC9P31274 260 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 DDR1Q08345 913 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 AUHQ13825 339 aaKnown RBP7.3□□□□□ -1.24
SF3B3-214ENST00000572365 RRS1Q15050 365 aaKnown RBP7.3□□□□□ -1.24
SF3B3-214ENST00000572365 LONRF2Q1L5Z9 754 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 DEFB115Q30KQ5 88 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 OGFOD3Q6PK18 319 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 ZAR1Q86SH2 424 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 APBA2Q99767 749 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 MCOLN1Q9GZU1 580 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 SLC12A5Q9H2X9 1139 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 TMEM260Q9NX78 707 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 STOML1Q9UBI4 398 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 C4AP0C0L4 1744 aa7.3□□□□□ -1.24
SF3B3-214ENST00000572365 EVC2Q86UK5 1308 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 CNTNAP4Q9C0A0 1308 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 WDR33Q9C0J8 1336 aaKnown RBP7.29□□□□□ -1.24
SF3B3-214ENST00000572365 FAM208AQ9UK61 1670 aaKnown RBP7.29□□□□□ -1.24
SF3B3-214ENST00000572365 ADCY3O60266 1144 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 CD247P20963 164 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 ADMP35318 185 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 SQSTM1Q13501 440 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 NBPF9Q3BBW0 867 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 PRR23CQ6ZRP0 262 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 C22orf34Q6ZV56 151 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 LRRC47Q8N1G4 583 aaKnown RBP7.29□□□□□ -1.24
SF3B3-214ENST00000572365 RAPGEF4Q8WZA2 1011 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 TP53INP1Q96A56 240 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 SPATA9Q9BWV2 254 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 GBP3Q9H0R5 595 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 PRDM5Q9NQX1 630 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-214ENST00000572365 TPX2Q9ULW0 747 aaKnown RBP7.29□□□□□ -1.24
SF3B3-214ENST00000572365 ZNF451Q9Y4E5 1061 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 TIAM2Q8IVF5 1701 aa7.29□□□□□ -1.24
SF3B3-214ENST00000572365 MAP3K19Q56UN5 1328 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 A0A087WZG4 1122 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 AGRPO00253 132 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 IGF2BP3O00425 579 aaKnown RBP eCLIP7.28□□□□□ -1.24
SF3B3-214ENST00000572365 SV2CQ496J9 727 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 PLEKHG4Q58EX7 1191 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 TBC1D32Q96NH3 1257 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 GP6Q9HCN6 339 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 ATG3Q9NT62 314 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 PRR13Q9NZ81 148 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 WHRNQ9P202 907 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 APEX2Q9UBZ4 518 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 ABT1Q9ULW3 272 aaKnown RBP7.28□□□□□ -1.24
SF3B3-214ENST00000572365 LEMD3Q9Y2U8 911 aa7.28□□□□□ -1.24
SF3B3-214ENST00000572365 ESYT3A0FGR9 886 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 PPM1BO75688 479 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 KIR3DL1P43629 444 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 SFRP5Q5T4F7 317 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 RNF43Q68DV7 783 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 CYP4F22Q6NT55 531 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 HOMER1Q86YM7 354 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 ZBTB38Q8NAP3 1195 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-214ENST00000572365 APPBP2Q92624 585 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 RCC1LQ96I51 464 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms