RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CREBRFQ8IUR6 639 aa20.28■□□□□ 0.84
SMPD3-211ENST00000568373 KIAA0895Q8NCT3 520 aa20.28■□□□□ 0.84
SMPD3-211ENST00000568373 SRRTQ9BXP5 876 aaKnown RBP20.28■□□□□ 0.84
SMPD3-211ENST00000568373 MYOZ2Q9NPC6 264 aa20.28■□□□□ 0.84
SMPD3-211ENST00000568373 TAL1P17542 331 aaPredicted RBP20.28■□□□□ 0.84
SMPD3-211ENST00000568373 KIF18AQ8NI77 898 aa20.28■□□□□ 0.84
SMPD3-211ENST00000568373 DUSP9Q99956 384 aaKnown RBP20.28■□□□□ 0.84
SMPD3-211ENST00000568373 NT5C3AQ9H0P0 336 aa20.28■□□□□ 0.84
SMPD3-211ENST00000568373 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
SMPD3-211ENST00000568373 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.28■□□□□ 0.84
SMPD3-211ENST00000568373 PIK3CDO00329 1044 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 ZSCAN12O43309 604 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 SLC26A4O43511 780 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 TUBB4AP04350 444 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 POLD1P28340 1107 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 MAP3K10Q02779 954 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 Q4G0T1 1027 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 DYMQ7RTS9 669 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 TEX2Q8IWB9 1127 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 CSGALNACT2Q8N6G5 542 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 SH2D4AQ9H788 454 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 SMCHD1A6NHR9 2005 aa20.27■□□□□ 0.84
SMPD3-211ENST00000568373 TBX3O15119 743 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 MFAP3LO75121 409 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 GYPCP04921 128 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 PRR16Q569H4 304 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 ETNPPLQ8TBG4 499 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 DDX12PQ92771 950 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 HPS3Q969F9 1004 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.26■□□□□ 0.83
SMPD3-211ENST00000568373 MAGEC2Q9UBF1 373 aaPredicted RBP20.26■□□□□ 0.83
SMPD3-211ENST00000568373 TNIP1Q15025 636 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 ANKRD40Q6AI12 368 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 CNGA4Q8IV77 575 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 CHURC1Q8WUH1 139 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 CPLX3Q8WVH0 158 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 NAA15Q9BXJ9 866 aaKnown RBP20.26■□□□□ 0.83
SMPD3-211ENST00000568373 SLC39A2Q9NP94 309 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 PPP2R2CQ9Y2T4 447 aa20.26■□□□□ 0.83
SMPD3-211ENST00000568373 SHTN1A0MZ66 631 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 LGALS16A8MUM7 142 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 NFKBIEO00221 500 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 CTIFO43310 598 aaKnown RBP20.25■□□□□ 0.83
SMPD3-211ENST00000568373 PLA2G6O60733 806 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 TPM1P09493 284 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 HOXA7P31268 230 aaPredicted RBP20.25■□□□□ 0.83
SMPD3-211ENST00000568373 HOXA13P31271 388 aaPredicted RBP20.25■□□□□ 0.83
SMPD3-211ENST00000568373 CASP14P31944 242 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 CIITAP33076 1130 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 REXO1L1PQ8IX06 675 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 LENG9Q96B70 501 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 CCDC51Q96ER9 411 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 UIMC1Q96RL1 719 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 RANBP17Q9H2T7 1088 aaKnown RBP20.25■□□□□ 0.83
SMPD3-211ENST00000568373 FAM86B1E9PN63 330 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 ASNSP08243 561 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 FAM86B2P0C5J1 330 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 UBXN1Q04323 297 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 TRIM14Q14142 442 aa20.25■□□□□ 0.83
SMPD3-211ENST00000568373 FXR1P51114 621 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMPD3-211ENST00000568373 EHHADHQ08426 723 aa20.24■□□□□ 0.83
SMPD3-211ENST00000568373 SPIRE1Q08AE8 756 aa20.24■□□□□ 0.83
SMPD3-211ENST00000568373 CENPPQ6IPU0 288 aa20.24■□□□□ 0.83
SMPD3-211ENST00000568373 TSC1Q92574 1164 aa20.24■□□□□ 0.83
SMPD3-211ENST00000568373 KIFC2Q96AC6 838 aa20.24■□□□□ 0.83
SMPD3-211ENST00000568373 CYP3A4P08684 503 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 IDEP14735 1019 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 ZNF280AP59817 542 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-211ENST00000568373 PSMD2Q13200 908 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 ZYXQ15942 572 aaKnown RBP20.23■□□□□ 0.83
SMPD3-211ENST00000568373 TOGARAM2Q6ZUX3 1019 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 FAM160B2Q86V87 743 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 FAM114A1Q8IWE2 563 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 DNAJC19Q96DA6 116 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 FAM20AQ96MK3 541 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 KIAA1024Q9UPX6 916 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 A0A1W2PQC6 194 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 POTEB3A0JP26 581 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 POTECB2RU33 542 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 STAT3P40763 770 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 ETF1P62495 437 aaKnown RBP20.23■□□□□ 0.83
SMPD3-211ENST00000568373 RASA3Q14644 834 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 HAUS3Q68CZ6 603 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 CCDC174Q6PII3 467 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 POTEBQ6S5H4 581 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 SYT10Q6XYQ8 523 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 GUF1Q8N442 669 aaKnown RBP20.23■□□□□ 0.83
SMPD3-211ENST00000568373 MB21D1Q8N884 522 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 ZNF507Q8TCN5 953 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 GLIS2Q9BZE0 524 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-211ENST00000568373 SEMA6BQ9H3T3 888 aa20.23■□□□□ 0.83
SMPD3-211ENST00000568373 GOLGA6L9A6NEM1 432 aa20.22■□□□□ 0.83
SMPD3-211ENST00000568373 FECHP22830 423 aa20.22■□□□□ 0.83
SMPD3-211ENST00000568373 RPS12P25398 132 aaKnown RBP20.22■□□□□ 0.83
SMPD3-211ENST00000568373 FEM1BQ9UK73 627 aa20.22■□□□□ 0.83
SMPD3-211ENST00000568373 RBM10P98175 930 aaKnown RBP20.22■□□□□ 0.83
SMPD3-211ENST00000568373 CNOT6LQ96LI5 555 aaKnown RBP20.22■□□□□ 0.83
SMPD3-211ENST00000568373 TUBGCP2Q9BSJ2 902 aa20.22■□□□□ 0.83
SMPD3-211ENST00000568373 BMP2KQ9NSY1 1161 aaPredicted RBP20.22■□□□□ 0.83
SMPD3-211ENST00000568373 ATAD5Q96QE3 1844 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms