RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 USP49Q70CQ1 688 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 TMC4Q7Z404 712 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 NLRP14Q86W24 1093 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 FMNL3Q8IVF7 1028 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 GDAP1L1Q96MZ0 367 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 CCT8L2Q96SF2 557 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 LRRC1Q9BTT6 524 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 RTFDC1Q9BY42 306 aaPredicted RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 PUS7LQ9H0K6 701 aaKnown RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 RBM28Q9NW13 759 aaKnown RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 CEP131Q9UPN4 1083 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 LEMD3Q9Y2U8 911 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 XDHP47989 1333 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 KLHL33A6NCF5 533 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 RASSF10A6NK89 507 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 BTBD18B2RXH4 712 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 BHMG1C9JSJ3 638 aaPredicted RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 KRT86O43790 486 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 RDXP35241 583 aaKnown RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 MDH1P40925 334 aaKnown RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 IARSP41252 1262 aaKnown RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 ICA1Q05084 483 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 CTDSPL2Q05D32 466 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 ITGB3BPQ13352 177 aaPredicted RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 SNCBQ16143 134 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 CCDC122Q5T0U0 273 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 STYK1Q6J9G0 422 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 RCSD1Q6JBY9 416 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 CYB5D1Q6P9G0 228 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 ADGRA1Q86SQ6 560 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 MB21D1Q8N884 522 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 SPATA4Q8NEY3 305 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 WASF1Q92558 559 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 APPBP2Q92624 585 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 PHKBQ93100 1093 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 SGSM3Q96HU1 749 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 NUP88Q99567 741 aaPredicted RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 LACRTQ9GZZ8 138 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 GNEQ9Y223 722 aaKnown RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 PCDHB6Q9Y5E3 794 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 LGALS16A8MUM7 142 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 KCNJ18B7U540 433 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 ZNF213O14771 459 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 HSF2BPO75031 334 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 BBOX1O75936 387 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 DNAJC8O75937 253 aaPredicted RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 PAEPP09466 180 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 NPR1P16066 1061 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 IFFO1Q0D2I5 559 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 TBC1D8BQ0IIM8 1120 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 BYSLQ13895 437 aaKnown RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 KCNJ12Q14500 433 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 TMEM259Q4ZIN3 620 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 CEP85LQ5SZL2 805 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 TBC1D10CQ8IV04 446 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 SP8Q8IXZ3 490 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 EIF1ADQ8N9N8 165 aaKnown RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 P3H4Q92791 437 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 RBM17Q96I25 401 aaKnown RBP6.04□□□□□ -1.44
LINC01541-202ENST00000568095 SENP2Q9HC62 589 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 EMILIN3Q9NT22 766 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 STIM2Q9P246 746 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 POLLQ9UGP5 575 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 ATP6V0A2Q9Y487 856 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 MYH6P13533 1939 aa6.04□□□□□ -1.44
LINC01541-202ENST00000568095 N4BP3O15049 544 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 GHRP10912 638 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 PDE6AP16499 860 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 PAX7P23759 505 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 HNRNPH3P31942 346 aaKnown RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 BAG6P46379 1132 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 GYG1P46976 350 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 RCAN1P53805 252 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 STX17P56962 302 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 HAND2P61296 217 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TRIM29Q14134 588 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 SKIDA1Q1XH10 827 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 ANKRD20A8PQ5CZ79 823 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 FIGNQ5HY92 759 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 CCDC70Q6NSX1 233 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 PDXDC2PQ6P474 469 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 RALYLQ86SE5 291 aaKnown RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 RAB11FIP4Q86YS3 637 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 OSBPL7Q9BZF2 842 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TSGA10Q9BZW7 698 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TPX2Q9ULW0 747 aaKnown RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TACC3Q9Y6A5 838 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 PAPPA2Q9BXP8 1791 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 A0A1W2PQJ5 194 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 HMGB1P1B2RPK0 211 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 H0YHG0 523 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 UBE2Q2LH0YL09 131 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 DNM1LO00429 736 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 ZBTB43O43298 467 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 MYBP10242 640 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 CALRP27797 417 aaKnown RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 CCT6AP40227 531 aaKnown RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 VAV2P52735 878 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 HDLBPQ00341 1268 aaKnown RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 SSRP1Q08945 709 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms