RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 DCP1AQ9NPI6 582 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-210ENST00000567654 ENAMQ9NRM1 1142 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 LMBRD1Q9NUN5 540 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 ZSWIM5Q9P217 1185 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 ANAPC4Q9UJX5 808 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 WDR19Q8NEZ3 1342 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 PTPDC1A2A3K4 754 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 PRDM1O75626 825 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 F13A1P00488 732 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 GHRHP01286 108 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 FDPSP14324 419 aaKnown RBP6.71□□□□□ -1.34
SF3B3-210ENST00000567654 BTDP43251 543 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 MAPK8P45983 427 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 DGKGP49619 791 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 FGD1P98174 961 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 HYAL2Q12891 473 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 RRP12Q5JTH9 1297 aaKnown RBP6.71□□□□□ -1.34
SF3B3-210ENST00000567654 MFSD14BQ5SR56 506 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 FAM173BQ6P4H8 233 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 C20orf204Q6ZNR8 217 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 PLD4Q96BZ4 506 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 ZNF274Q96GC6 653 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-210ENST00000567654 ASB16Q96NS5 453 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 HHIPQ96QV1 700 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 CITED4Q96RK1 184 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 MYL10Q9BUA6 226 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 RASSF4Q9H2L5 321 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 DBNDD1Q9H9R9 158 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 SALL4Q9UJQ4 1053 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 NAP1L2Q9ULW6 460 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-210ENST00000567654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.71□□□□□ -1.34
SF3B3-210ENST00000567654 PCDHAC2Q9Y5I4 1007 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 GAKO14976 1311 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 WDR33Q9C0J8 1336 aaKnown RBP6.71□□□□□ -1.34
SF3B3-210ENST00000567654 SMCHD1A6NHR9 2005 aa6.71□□□□□ -1.34
SF3B3-210ENST00000567654 NID2Q14112 1375 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 VPS37CA5D8V6 355 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-210ENST00000567654 GOLGA8BA8MQT2 603 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 F8W031 263 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-210ENST00000567654 UBE2Q2LH0YL09 131 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 EIF1AYO14602 144 aaKnown RBP6.7□□□□□ -1.34
SF3B3-210ENST00000567654 TREHO43280 583 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 GADD45BO75293 160 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-210ENST00000567654 RGS9O75916 674 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-210ENST00000567654 KIF4AO95239 1232 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 ZBTB7AO95365 584 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 FGRP09769 529 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 DPEP1P16444 411 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 CDC27P30260 824 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 IRS1P35568 1242 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 RHBDL3P58872 404 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 SEC23AQ15436 765 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 TMEM67Q5HYA8 995 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 SPTY2D1Q68D10 685 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-210ENST00000567654 GDF6Q6KF10 455 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-210ENST00000567654 APOA5Q6Q788 366 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 MFSD6Q6ZSS7 791 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 FERMT3Q86UX7 667 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 CCDC144CPQ8IYA2 1237 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 GPT2Q8TD30 523 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 DYNLL2Q96FJ2 89 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 DMRTB1Q96MA1 342 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 AIFM3Q96NN9 605 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 CRNKL1Q9BZJ0 848 aaKnown RBP6.7□□□□□ -1.34
SF3B3-210ENST00000567654 NACAP1Q9BZK3 213 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 COA1Q9GZY4 146 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 GJB4Q9NTQ9 266 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 ANGEL1Q9UNK9 670 aaKnown RBP6.7□□□□□ -1.34
SF3B3-210ENST00000567654 TRIM33Q9UPN9 1127 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 CNPY2Q9Y2B0 182 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 DAGLAQ9Y4D2 1042 aa6.7□□□□□ -1.34
SF3B3-210ENST00000567654 ROBO3Q96MS0 1386 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 GPR75-ASB3A0A0A6YYF3 556 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 PNMA6FA0A0J9YX94 578 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 ANKRD33BA6NCL7 494 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 YDJCA8MPS7 323 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 IFIT3O14879 490 aaKnown RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 ECE2O60344 883 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 RANBP6O60518 1105 aaKnown RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 NMT2O60551 498 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 PRPF40AO75400 957 aaKnown RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 HOXD8P13378 290 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 PLCD1P51178 756 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 GUCY1B3Q02153 619 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 TRDNQ13061 729 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 RESTQ13127 1097 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 DSC3Q14574 896 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 NTRK3Q16288 839 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 AOC3Q16853 763 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 SBK1Q52WX2 424 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 FAM47AQ5JRC9 791 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 TMCO4Q5TGY1 634 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 LARP1BQ659C4 914 aaKnown RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 OTUD7BQ6GQQ9 843 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 GIMAP6Q6P9H5 292 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 DNAJC14Q6Y2X3 702 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 SGMS1Q86VZ5 419 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 MAPKAPK5Q8IW41 473 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 ZSCAN29Q8IWY8 852 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 CEP120Q8N960 986 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 225.6 ms