RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 HOXA13P31271 388 aaPredicted RBP7.06□□□□□ -1.28
CHD9-217ENST00000565832 AFMP43652 599 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 VAC14Q08AM6 782 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 NONOQ15233 471 aaKnown RBP eCLIP7.06□□□□□ -1.289e-7■■■■□ 20.8
CHD9-217ENST00000565832 Q3C1V9 767 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 CCDC174Q6PII3 467 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 KRBA2Q6ZNG9 492 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 ADAMTS19Q8TE59 1207 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 GMCL1Q96IK5 515 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 ARHGEF10LQ9HCE6 1279 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 RIC8AQ9NPQ8 531 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 PCDHA5Q9Y5H7 936 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 MYH7BA7E2Y1 1941 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 COL2A1P02458 1487 aaPredicted RBP7.06□□□□□ -1.28
CHD9-217ENST00000565832 MEIS2O14770 477 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 CTAGE5O15320 804 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 TECP42680 631 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 TRAPPC10P48553 1259 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 SYDE2Q5VT97 1194 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 C9orf131Q5VYM1 1079 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 GALNT17Q6IS24 598 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 CCDC12Q8WUD4 166 aaPredicted RBP7.06□□□□□ -1.28
CHD9-217ENST00000565832 MTRQ99707 1265 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 PRR14Q9BWN1 585 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 FAM13BQ9NYF5 915 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 BRCA2P51587 3418 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 ADCY5O95622 1261 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 ASNSP08243 561 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 TXKP42681 527 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 STAT2P52630 851 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 SPP2Q13103 211 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 TNFAIP1Q13829 316 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 KARSQ15046 597 aaKnown RBP7.05□□□□□ -1.28
CHD9-217ENST00000565832 DTHD1Q6ZMT9 781 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 NEK8Q86SG6 692 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 FAM200AQ8TCP9 573 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 LRRC15Q8TF66 581 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 FERMT2Q96AC1 680 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 WRNIP1Q96S55 665 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 FEZ1Q99689 392 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 VCPKMTQ9H867 229 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 ESYT2A0FGR8 921 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 MRPL12P52815 198 aaKnown RBP7.05□□□□□ -1.28
CHD9-217ENST00000565832 IQCB1Q15051 598 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 SLC30A10Q6XR72 485 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 KRT25Q7Z3Z0 450 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 FBXO11Q86XK2 927 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 DHX40Q8IX18 779 aaKnown RBP7.05□□□□□ -1.28
CHD9-217ENST00000565832 CYP2W1Q8TAV3 490 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 CUL5Q93034 780 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 WNT2BQ93097 391 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 WNK4Q96J92 1243 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 AGBL1Q96MI9 1066 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 TIGD1Q96MW7 591 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 AMNQ9BXJ7 453 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 BLZF1Q9H2G9 400 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 ZHX2Q9Y6X8 837 aa7.05□□□□□ -1.28
CHD9-217ENST00000565832 ADM5C9JUS6 153 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 NEMFO60524 1076 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 CTNND1O60716 968 aaKnown RBP7.04□□□□□ -1.28
CHD9-217ENST00000565832 COBLO75128 1261 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 UBXN2AP68543 259 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 STX1AQ16623 288 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 DESI1Q6ICB0 168 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 BTNL9Q6UXG8 535 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 MOB2Q70IA6 237 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 FCHSD1Q86WN1 690 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 CPXCR1Q8N123 301 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 PAGE5Q96GU1 130 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 ZNF830Q96NB3 372 aaPredicted RBP7.04□□□□□ -1.28
CHD9-217ENST00000565832 PPP1R9BQ96SB3 815 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 USB1Q9BQ65 265 aaKnown RBP7.04□□□□□ -1.28
CHD9-217ENST00000565832 NUDT12Q9BQG2 462 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 TSR3Q9UJK0 312 aaKnown RBP7.04□□□□□ -1.28
CHD9-217ENST00000565832 DICER1Q9UPY3 1922 aaKnown RBP7.04□□□□□ -1.28
CHD9-217ENST00000565832 DNAH12Q6ZR08 3092 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 ATAD5Q96QE3 1844 aa7.04□□□□□ -1.28
CHD9-217ENST00000565832 PEX10O60683 326 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 CFBP00751 764 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 PTPRAP18433 802 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 POSTNQ15063 836 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 GPR162Q16538 588 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 HSP90AA4PQ58FG1 418 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 BRICD5Q6PL45 260 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 SCUBE3Q8IX30 993 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 SMYD4Q8IYR2 804 aaPredicted RBP7.03□□□□□ -1.28
CHD9-217ENST00000565832 AOPEPQ8N6M6 819 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 ANP32BQ92688 251 aaKnown RBP7.03□□□□□ -1.28
CHD9-217ENST00000565832 HAS1Q92839 578 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 PDLIM2Q96JY6 352 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 MTMR9Q96QG7 549 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 TUBE1Q9UJT0 475 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 PCDHB3Q9Y5E6 796 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 POTEMA6NI47 508 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 hCG_1984214I3L0E3 225 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 USP2O75604 605 aaPredicted RBP7.03□□□□□ -1.28
CHD9-217ENST00000565832 BMP15O95972 392 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 OR52Z1P0C646 297 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 SLFN14P0C7P3 912 aa7.03□□□□□ -1.28
CHD9-217ENST00000565832 HMGCS2P54868 508 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms