RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 FBXL7Q9UJT9 491 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 A0A1W2PQ27 194 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 A0A1W2PQ64 194 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 A0A1W2PQC6 194 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 A0A1W2PQD8 194 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 WTIPA6NIX2 430 aaPredicted RBP6.57□□□□□ -1.36
LINC00560-201ENST00000564593 FAM47E-STBD1D6RA91 191 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 C8AP07357 584 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 FUT4P22083 530 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 ABHD17CQ6PCB6 329 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 SLC23A3Q6PIS1 610 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 CEP68Q76N32 757 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 SPPL2CQ8IUH8 684 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 ABI1Q8IZP0 508 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 PI4K2BQ8TCG2 481 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 TMEM169Q96HH4 297 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 IPPKQ9H8X2 491 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 PAK6Q9NQU5 681 aaPredicted RBP6.57□□□□□ -1.36
LINC00560-201ENST00000564593 PPARGC1AQ9UBK2 798 aaKnown RBP6.57□□□□□ -1.36
LINC00560-201ENST00000564593 PPP1R11O60927 126 aaPredicted RBP6.56□□□□□ -1.36
LINC00560-201ENST00000564593 GRK2P25098 689 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 GRK3P35626 688 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 RBM10P98175 930 aaKnown RBP6.56□□□□□ -1.36
LINC00560-201ENST00000564593 CHRNEQ04844 493 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 HSF5Q4G112 596 aaPredicted RBP6.56□□□□□ -1.36
LINC00560-201ENST00000564593 PKN3Q6P5Z2 889 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 TP53INP2Q8IXH6 220 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 OXR1Q8N573 874 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 IGSF22Q8N9C0 903 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 PDZD8Q8NEN9 1154 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 FAM126AQ9BYI3 521 aaPredicted RBP6.56□□□□□ -1.36
LINC00560-201ENST00000564593 MARCH2Q9P0N8 246 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 ATP8A1Q9Y2Q0 1164 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 COQ6Q9Y2Z9 468 aa6.56□□□□□ -1.36
LINC00560-201ENST00000564593 GSTA4O15217 222 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 NPTXRO95502 500 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 FUCA1P04066 466 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 DNM2P50570 870 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 ST5P78524 1137 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 PLCL1Q15111 1095 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 FAM47CQ5HY64 1035 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 GALNT18Q6P9A2 607 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 NFXL1Q6ZNB6 911 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 TEX2Q8IWB9 1127 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 NLGN2Q8NFZ4 835 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 USP33Q8TEY7 942 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 FBXW5Q969U6 566 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 TRMT2BQ96GJ1 504 aaKnown RBP6.55□□□□□ -1.36
LINC00560-201ENST00000564593 KCNJ15Q99712 375 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 JAM3Q9BX67 310 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 IMPACTQ9P2X3 320 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 RWDD3Q9Y3V2 267 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 TAF6LQ9Y6J9 622 aa6.55□□□□□ -1.36
LINC00560-201ENST00000564593 CCDC66A2RUB6 948 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 FITM1A5D6W6 292 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 H7BY64 318 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 M0R2C6 588 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 GLRX3O76003 335 aaKnown RBP6.54□□□□□ -1.36
LINC00560-201ENST00000564593 CKMP06732 381 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 PYGMP11217 842 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 POU3F3P20264 500 aaPredicted RBP6.54□□□□□ -1.36
LINC00560-201ENST00000564593 FPR2P25090 351 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 CORO7P57737 925 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 NLRP10Q86W26 655 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 RPUSD2Q8IZ73 545 aaKnown RBP6.54□□□□□ -1.36
LINC00560-201ENST00000564593 LZTR1Q8N653 840 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 ASIC4Q96FT7 647 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 CELF4Q9BZC1 486 aaKnown RBP6.54□□□□□ -1.36
LINC00560-201ENST00000564593 CDIP1Q9H305 208 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.54□□□□□ -1.36
LINC00560-201ENST00000564593 MCM8Q9UJA3 840 aa6.54□□□□□ -1.36
LINC00560-201ENST00000564593 C22orf46C9J442 243 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 WNT9AO14904 365 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 NRDCO43847 1150 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 CPEP16870 476 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 STRN3Q13033 797 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
LINC00560-201ENST00000564593 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 WWC2Q6AWC2 1192 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 C16orf59Q7L2K0 433 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 STRA8Q7Z7C7 330 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 ANKLE2Q86XL3 938 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 DDX42Q86XP3 938 aaKnown RBP eCLIP6.53□□□□□ -1.36
LINC00560-201ENST00000564593 AFAP1L2Q8N4X5 818 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 AGBL5Q8NDL9 886 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 NUP43Q8NFH3 380 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 CATSPERZQ9NTU4 200 aa6.53□□□□□ -1.36
LINC00560-201ENST00000564593 NOTOA8MTQ0 251 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 PRKCAP17252 672 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 CDK11BP21127 795 aaKnown RBP6.52□□□□□ -1.36
LINC00560-201ENST00000564593 GDNFP39905 211 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 SCNN1BP51168 640 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 ERVFC1P60507 584 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 CRY1Q16526 586 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 TMEM177Q53S58 311 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 ATL2Q8NHH9 583 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 PLEKHO2Q8TD55 490 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 PANK1Q8TE04 598 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 PLCD4Q9BRC7 762 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 MTA3Q9BTC8 594 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms