RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 RAG1P15918 1043 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 PSMA5P28066 241 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 RCAN1P53805 252 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 FGD1P98174 961 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 PURAQ00577 322 aaKnown RBP21.94■■□□□ 1.1
TRADD-203ENST00000563348 RTN1Q16799 776 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 FAM126BQ8IXS8 530 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 FBXL16Q8N461 479 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 TBX21Q9UL17 535 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 MEIS2O14770 477 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 TLR3O15455 904 aaKnown RBP21.93■■□□□ 1.1
TRADD-203ENST00000563348 RGS20O76081 388 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 CD4P01730 458 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 MYL3P08590 195 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 RPS6KB1P23443 525 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 CCND2P30279 289 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 PSMC6P62333 389 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 FUT2Q10981 343 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 LRIT3Q3SXY7 679 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 USP17L6PQ6QN14 398 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 Q6ZUG5 572 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 IL31RAQ8NI17 732 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 CUL5Q93034 780 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 MTG1Q9BT17 334 aaPredicted RBP21.93■■□□□ 1.1
TRADD-203ENST00000563348 FAM217BQ9NTX9 383 aaPredicted RBP21.93■■□□□ 1.1
TRADD-203ENST00000563348 MRVI1Q9Y6F6 885 aa21.93■■□□□ 1.1
TRADD-203ENST00000563348 ARHGAP1Q07960 439 aa21.92■■□□□ 1.1
TRADD-203ENST00000563348 KCNV1Q6PIU1 500 aa21.92■■□□□ 1.1
TRADD-203ENST00000563348 SMARCC2Q8TAQ2 1214 aa21.92■■□□□ 1.1
TRADD-203ENST00000563348 PSTPIP2Q9H939 334 aa21.92■■□□□ 1.1
TRADD-203ENST00000563348 FRMPD4Q14CM0 1322 aa21.91■■□□□ 1.1
TRADD-203ENST00000563348 GOLGA8AA7E2F4 631 aa21.91■■□□□ 1.1
TRADD-203ENST00000563348 GOLGA8BA8MQT2 603 aa21.91■■□□□ 1.1
TRADD-203ENST00000563348 TIMP1P01033 207 aa21.91■■□□□ 1.1
TRADD-203ENST00000563348 APOBRQ0VD83 1088 aa21.91■■□□□ 1.1
TRADD-203ENST00000563348 AFG1LQ8WV93 481 aa21.91■■□□□ 1.1
TRADD-203ENST00000563348 BRF1Q92994 677 aa21.91■■□□□ 1.1
TRADD-203ENST00000563348 EMID1Q96A84 441 aaPredicted RBP21.91■■□□□ 1.1
TRADD-203ENST00000563348 AGXT2Q9BYV1 514 aa21.91■■□□□ 1.1
TRADD-203ENST00000563348 SZT2Q5T011 3432 aa21.91■■□□□ 1.1
TRADD-203ENST00000563348 CNTNAP5Q8WYK1 1306 aa21.9■■□□□ 1.1
TRADD-203ENST00000563348 SOX1O00570 391 aaPredicted RBP21.9■■□□□ 1.1
TRADD-203ENST00000563348 TGFB3P10600 412 aa21.9■■□□□ 1.1
TRADD-203ENST00000563348 CASTP20810 708 aaKnown RBP21.9■■□□□ 1.1
TRADD-203ENST00000563348 CDC27P30260 824 aa21.9■■□□□ 1.1
TRADD-203ENST00000563348 LAMC2Q13753 1193 aa21.9■■□□□ 1.1
TRADD-203ENST00000563348 ZFP91Q96JP5 570 aaPredicted RBP21.9■■□□□ 1.1
TRADD-203ENST00000563348 NAP1L2Q9ULW6 460 aaPredicted RBP21.9■■□□□ 1.1
TRADD-203ENST00000563348 V9GY48 417 aaPredicted RBP21.9■■□□□ 1.1
TRADD-203ENST00000563348 CCDC196A0A1B0GTZ2 297 aa21.89■■□□□ 1.09
TRADD-203ENST00000563348 STAM2O75886 525 aa21.89■■□□□ 1.09
TRADD-203ENST00000563348 MMP3P08254 477 aa21.89■■□□□ 1.09
TRADD-203ENST00000563348 ADD1P35611 737 aaKnown RBP21.89■■□□□ 1.09
TRADD-203ENST00000563348 MRPS9P82933 396 aaKnown RBP21.89■■□□□ 1.09
TRADD-203ENST00000563348 XRRA1Q6P2D8 792 aa21.89■■□□□ 1.09
TRADD-203ENST00000563348 HEATR3Q7Z4Q2 680 aa21.89■■□□□ 1.09
TRADD-203ENST00000563348 TRPV6Q9H1D0 765 aa21.89■■□□□ 1.09
TRADD-203ENST00000563348 ZSWIM6Q9HCJ5 1215 aa21.89■■□□□ 1.09
TRADD-203ENST00000563348 METAP2P50579 478 aaKnown RBP eCLIP21.88■■□□□ 1.09
TRADD-203ENST00000563348 NBPF20Q3BBV1 942 aa21.88■■□□□ 1.09
TRADD-203ENST00000563348 MFSD5Q6N075 450 aa21.88■■□□□ 1.09
TRADD-203ENST00000563348 DHX37Q8IY37 1157 aaKnown RBP21.88■■□□□ 1.09
TRADD-203ENST00000563348 GPKOWQ92917 476 aaPredicted RBP eCLIP21.88■■□□□ 1.09
TRADD-203ENST00000563348 ALDH8A1Q9H2A2 487 aaPredicted RBP21.88■■□□□ 1.09
TRADD-203ENST00000563348 KIAA1217Q5T5P2 1943 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 B4GALT4O60513 344 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 ICAM3P32942 547 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 SP2Q02086 613 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 FPGSQ05932 587 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 SHHQ15465 462 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 GNPTABQ3T906 1256 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 CELF3Q5SZQ8 465 aaKnown RBP21.87■■□□□ 1.09
TRADD-203ENST00000563348 MYSM1Q5VVJ2 828 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 WWC2Q6AWC2 1192 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 RUFY3Q7L099 469 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 PPTC7Q8NI37 304 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 LRCH3Q96II8 777 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 INPP4AQ96PE3 977 aaPredicted RBP21.87■■□□□ 1.09
TRADD-203ENST00000563348 TM6SF1Q9BZW5 370 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 LTBP2Q14767 1821 aa21.87■■□□□ 1.09
TRADD-203ENST00000563348 EPHB4P54760 987 aa21.86■■□□□ 1.09
TRADD-203ENST00000563348 EVCP57679 992 aa21.86■■□□□ 1.09
TRADD-203ENST00000563348 DGKDQ16760 1214 aa21.86■■□□□ 1.09
TRADD-203ENST00000563348 C9orf50Q5SZB4 431 aa21.86■■□□□ 1.09
TRADD-203ENST00000563348 PCNX4Q63HM2 1172 aa21.86■■□□□ 1.09
TRADD-203ENST00000563348 NFRKBQ6P4R8 1299 aa21.86■■□□□ 1.09
TRADD-203ENST00000563348 TEX2Q8IWB9 1127 aa21.86■■□□□ 1.09
TRADD-203ENST00000563348 RTEL1Q9NZ71 1219 aa21.86■■□□□ 1.09
TRADD-203ENST00000563348 SPATA31C2B4DYI2 1134 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 hCG_1984214I3L0E3 225 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 PPFIA4O75335 1185 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 GGPS1O95749 300 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 SUPT20HL2P0C7V6 817 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 UBA1P22314 1058 aaKnown RBP21.85■■□□□ 1.09
TRADD-203ENST00000563348 NAPAP54920 295 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 PTPN11Q06124 597 aaPredicted RBP21.85■■□□□ 1.09
TRADD-203ENST00000563348 UBE2SQ16763 222 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 TYW1BQ6NUM6 668 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 PPP1R18Q6NYC8 613 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 ZNF713Q8N859 430 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms