RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 TOX2Q96NM4 488 aa24.32■■□□□ 1.48
NR4A1-219ENST00000562373 RANBP2P49792 3224 aaKnown RBP24.31■■□□□ 1.48
NR4A1-219ENST00000562373 MEIS2O14770 477 aa24.31■■□□□ 1.48
NR4A1-219ENST00000562373 SLC34A2O95436 690 aa24.31■■□□□ 1.48
NR4A1-219ENST00000562373 RPS6KB1P23443 525 aa24.31■■□□□ 1.48
NR4A1-219ENST00000562373 CPT1AP50416 773 aa24.31■■□□□ 1.48
NR4A1-219ENST00000562373 SMARCC2Q8TAQ2 1214 aa24.31■■□□□ 1.48
NR4A1-219ENST00000562373 AFG1LQ8WV93 481 aa24.31■■□□□ 1.48
NR4A1-219ENST00000562373 RBM28Q9NW13 759 aaKnown RBP24.31■■□□□ 1.48
NR4A1-219ENST00000562373 DDX41Q9UJV9 622 aaKnown RBP24.31■■□□□ 1.48
NR4A1-219ENST00000562373 V9GY48 417 aaPredicted RBP24.31■■□□□ 1.48
NR4A1-219ENST00000562373 CNTNAP5Q8WYK1 1306 aa24.31■■□□□ 1.48
NR4A1-219ENST00000562373 LTBP2Q14767 1821 aa24.31■■□□□ 1.48
NR4A1-219ENST00000562373 KIAA1217Q5T5P2 1943 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 KIAA0355O15063 1070 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 CABYRO75952 493 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 RAG1P15918 1043 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 ADD1P35611 737 aaKnown RBP24.3■■□□□ 1.48
NR4A1-219ENST00000562373 PURAQ00577 322 aaKnown RBP24.3■■□□□ 1.48
NR4A1-219ENST00000562373 FUT2Q10981 343 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 HEATR3Q7Z4Q2 680 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 FAM126BQ8IXS8 530 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 TDHQ8IZJ6 230 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 SLC43A3Q8NBI5 491 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 LRCH3Q96II8 777 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 POLR3EQ9NVU0 708 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 RTEL1Q9NZ71 1219 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 MRVI1Q9Y6F6 885 aa24.3■■□□□ 1.48
NR4A1-219ENST00000562373 A0A1W2PPC1 479 aa24.29■■□□□ 1.48
NR4A1-219ENST00000562373 A6NJR5 290 aa24.29■■□□□ 1.48
NR4A1-219ENST00000562373 GH1P01241 217 aa24.29■■□□□ 1.48
NR4A1-219ENST00000562373 CCND2P30279 289 aa24.29■■□□□ 1.48
NR4A1-219ENST00000562373 CHMP4BP1P59074 171 aa24.29■■□□□ 1.48
NR4A1-219ENST00000562373 ARHGAP1Q07960 439 aa24.29■■□□□ 1.48
NR4A1-219ENST00000562373 UBE2SQ16763 222 aa24.29■■□□□ 1.48
NR4A1-219ENST00000562373 TRPV6Q9H1D0 765 aa24.29■■□□□ 1.48
NR4A1-219ENST00000562373 PSTPIP2Q9H939 334 aa24.29■■□□□ 1.48
NR4A1-219ENST00000562373 PSMA5P28066 241 aa24.28■■□□□ 1.48
NR4A1-219ENST00000562373 MRPS9P82933 396 aaKnown RBP24.28■■□□□ 1.48
NR4A1-219ENST00000562373 WWC2Q6AWC2 1192 aa24.28■■□□□ 1.48
NR4A1-219ENST00000562373 CUL5Q93034 780 aa24.28■■□□□ 1.48
NR4A1-219ENST00000562373 LARP6Q9BRS8 491 aaKnown RBP24.28■■□□□ 1.48
NR4A1-219ENST00000562373 BCAS3Q9H6U6 928 aa24.28■■□□□ 1.48
NR4A1-219ENST00000562373 PPFIA3O75145 1194 aa24.27■■□□□ 1.48
NR4A1-219ENST00000562373 CD4P01730 458 aa24.27■■□□□ 1.48
NR4A1-219ENST00000562373 METAP2P50579 478 aaKnown RBP eCLIP24.27■■□□□ 1.48
NR4A1-219ENST00000562373 EPHB4P54760 987 aa24.27■■□□□ 1.48
NR4A1-219ENST00000562373 SP2Q02086 613 aa24.27■■□□□ 1.48
NR4A1-219ENST00000562373 SHHQ15465 462 aa24.27■■□□□ 1.48
NR4A1-219ENST00000562373 C9orf50Q5SZB4 431 aa24.27■■□□□ 1.48
NR4A1-219ENST00000562373 MTG1Q9BT17 334 aaPredicted RBP24.27■■□□□ 1.48
NR4A1-219ENST00000562373 PPP1R12CQ9BZL4 782 aa24.27■■□□□ 1.48
NR4A1-219ENST00000562373 TBX21Q9UL17 535 aa24.27■■□□□ 1.48
NR4A1-219ENST00000562373 MROH7Q68CQ1 1323 aa24.27■■□□□ 1.48
NR4A1-219ENST00000562373 TLR3O15455 904 aaKnown RBP24.26■■□□□ 1.47
NR4A1-219ENST00000562373 B4GALT4O60513 344 aa24.26■■□□□ 1.47
NR4A1-219ENST00000562373 MMP3P08254 477 aa24.26■■□□□ 1.47
NR4A1-219ENST00000562373 NBPF20Q3BBV1 942 aa24.26■■□□□ 1.47
NR4A1-219ENST00000562373 BRDTQ58F21 947 aaPredicted RBP24.26■■□□□ 1.47
NR4A1-219ENST00000562373 TYW1BQ6NUM6 668 aa24.26■■□□□ 1.47
NR4A1-219ENST00000562373 RUFY3Q7L099 469 aa24.26■■□□□ 1.47
NR4A1-219ENST00000562373 DHX37Q8IY37 1157 aaKnown RBP24.26■■□□□ 1.47
NR4A1-219ENST00000562373 ZSWIM6Q9HCJ5 1215 aa24.26■■□□□ 1.47
NR4A1-219ENST00000562373 MYH7BA7E2Y1 1941 aa24.25■■□□□ 1.47
NR4A1-219ENST00000562373 TIMP1P01033 207 aa24.25■■□□□ 1.47
NR4A1-219ENST00000562373 FAM47CQ5HY64 1035 aa24.25■■□□□ 1.47
NR4A1-219ENST00000562373 UPF3BQ9BZI7 483 aaKnown RBP24.25■■□□□ 1.47
NR4A1-219ENST00000562373 PIK3CDO00329 1044 aa24.24■■□□□ 1.47
NR4A1-219ENST00000562373 EPB41L2O43491 1005 aaKnown RBP24.24■■□□□ 1.47
NR4A1-219ENST00000562373 CCT2P78371 535 aaKnown RBP24.24■■□□□ 1.47
NR4A1-219ENST00000562373 TOB2Q14106 344 aaPredicted RBP24.24■■□□□ 1.47
NR4A1-219ENST00000562373 AGXT2Q9BYV1 514 aa24.24■■□□□ 1.47
NR4A1-219ENST00000562373 TRMT13Q9NUP7 481 aaKnown RBP24.24■■□□□ 1.47
NR4A1-219ENST00000562373 FRMPD4Q14CM0 1322 aa24.24■■□□□ 1.47
NR4A1-219ENST00000562373 UMODL1Q5DID0 1318 aa24.24■■□□□ 1.47
NR4A1-219ENST00000562373 GGPS1O95749 300 aa24.23■■□□□ 1.47
NR4A1-219ENST00000562373 CYP2C18P33260 490 aa24.23■■□□□ 1.47
NR4A1-219ENST00000562373 NAPAP54920 295 aa24.23■■□□□ 1.47
NR4A1-219ENST00000562373 PGBD1Q96JS3 809 aa24.23■■□□□ 1.47
NR4A1-219ENST00000562373 ALDH8A1Q9H2A2 487 aaPredicted RBP24.23■■□□□ 1.47
NR4A1-219ENST00000562373 CYP46A1Q9Y6A2 500 aa24.23■■□□□ 1.47
NR4A1-219ENST00000562373 STXBP3O00186 592 aa24.22■■□□□ 1.47
NR4A1-219ENST00000562373 KPNA6O60684 536 aa24.22■■□□□ 1.47
NR4A1-219ENST00000562373 UBA1P22314 1058 aaKnown RBP24.22■■□□□ 1.47
NR4A1-219ENST00000562373 SEMA3FQ13275 785 aa24.22■■□□□ 1.47
NR4A1-219ENST00000562373 LAMC2Q13753 1193 aa24.22■■□□□ 1.47
NR4A1-219ENST00000562373 CELF3Q5SZQ8 465 aaKnown RBP24.22■■□□□ 1.47
NR4A1-219ENST00000562373 MYSM1Q5VVJ2 828 aa24.22■■□□□ 1.47
NR4A1-219ENST00000562373 FBXL16Q8N461 479 aa24.22■■□□□ 1.47
NR4A1-219ENST00000562373 KAT2BQ92831 832 aa24.22■■□□□ 1.47
NR4A1-219ENST00000562373 NCOA5Q9HCD5 579 aaKnown RBP24.22■■□□□ 1.47
NR4A1-219ENST00000562373 PCDHA6Q9UN73 950 aa24.22■■□□□ 1.47
NR4A1-219ENST00000562373 PCDHA8Q9Y5H6 950 aa24.22■■□□□ 1.47
NR4A1-219ENST00000562373 CYP2C9P11712 490 aa24.21■■□□□ 1.47
NR4A1-219ENST00000562373 PDIA3P30101 505 aaKnown RBP24.21■■□□□ 1.47
NR4A1-219ENST00000562373 RCAN1P53805 252 aa24.21■■□□□ 1.47
NR4A1-219ENST00000562373 FPGSQ05932 587 aa24.21■■□□□ 1.47
NR4A1-219ENST00000562373 HSDL1Q3SXM5 330 aa24.21■■□□□ 1.47
NR4A1-219ENST00000562373 PHKBQ93100 1093 aa24.21■■□□□ 1.47
NR4A1-219ENST00000562373 TELO2Q9Y4R8 837 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms