RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 FCHSD1Q86WN1 690 aa17.09■□□□□ 0.33
RPL28-208ENST00000559463 FAM126BQ8IXS8 530 aa17.09■□□□□ 0.33
RPL28-208ENST00000559463 BADQ92934 168 aa17.09■□□□□ 0.33
RPL28-208ENST00000559463 FAM217BQ9NTX9 383 aaPredicted RBP17.09■□□□□ 0.33
RPL28-208ENST00000559463 TBX21Q9UL17 535 aa17.09■□□□□ 0.33
RPL28-208ENST00000559463 CDH23Q9H251 3354 aa17.08■□□□□ 0.33
RPL28-208ENST00000559463 A6NJR5 290 aa17.08■□□□□ 0.32
RPL28-208ENST00000559463 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
RPL28-208ENST00000559463 MYCLP12524 364 aaPredicted RBP17.08■□□□□ 0.32
RPL28-208ENST00000559463 ARHGAP1Q07960 439 aa17.08■□□□□ 0.32
RPL28-208ENST00000559463 FUT2Q10981 343 aa17.08■□□□□ 0.32
RPL28-208ENST00000559463 ITGA7Q13683 1181 aa17.08■□□□□ 0.32
RPL28-208ENST00000559463 RTN1Q16799 776 aa17.08■□□□□ 0.32
RPL28-208ENST00000559463 BLOC1S2Q6QNY1 142 aa17.08■□□□□ 0.32
RPL28-208ENST00000559463 VSIG10LQ86VR7 867 aa17.08■□□□□ 0.32
RPL28-208ENST00000559463 USP26Q9BXU7 913 aa17.08■□□□□ 0.32
RPL28-208ENST00000559463 TMEM39AQ9NV64 488 aa17.08■□□□□ 0.32
RPL28-208ENST00000559463 RBM28Q9NW13 759 aaKnown RBP17.08■□□□□ 0.32
RPL28-208ENST00000559463 DDX41Q9UJV9 622 aaKnown RBP17.08■□□□□ 0.32
RPL28-208ENST00000559463 NID2Q14112 1375 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 GOLGA8AA7E2F4 631 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 PIK3CDO00329 1044 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 MEIS2O14770 477 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 CD4P01730 458 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 MYL3P08590 195 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 CASTP20810 708 aaKnown RBP17.07■□□□□ 0.32
RPL28-208ENST00000559463 RPS6KB1P23443 525 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 CDC27P30260 824 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 USP17L6PQ6QN14 398 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 GPKOWQ92917 476 aaPredicted RBP eCLIP17.07■□□□□ 0.32
RPL28-208ENST00000559463 POLR3EQ9NVU0 708 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 COL6A3P12111 3177 aa17.07■□□□□ 0.32
RPL28-208ENST00000559463 KAT6AQ92794 2004 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 GBF1Q92538 1859 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 GH1P01241 217 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 CCND2P30279 289 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 RCAN1P53805 252 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 MRPS9P82933 396 aaKnown RBP17.06■□□□□ 0.32
RPL28-208ENST00000559463 FBXL16Q8N461 479 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 AFG1LQ8WV93 481 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 BRF1Q92994 677 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 LRCH3Q96II8 777 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 ZFP91Q96JP5 570 aaPredicted RBP17.06■□□□□ 0.32
RPL28-208ENST00000559463 AGXT2Q9BYV1 514 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 MRVI1Q9Y6F6 885 aa17.06■□□□□ 0.32
RPL28-208ENST00000559463 MMP3P08254 477 aa17.05■□□□□ 0.32
RPL28-208ENST00000559463 RAG1P15918 1043 aa17.05■□□□□ 0.32
RPL28-208ENST00000559463 FGD1P98174 961 aa17.05■□□□□ 0.32
RPL28-208ENST00000559463 BRDTQ58F21 947 aaPredicted RBP17.05■□□□□ 0.32
RPL28-208ENST00000559463 WWC2Q6AWC2 1192 aa17.05■□□□□ 0.32
RPL28-208ENST00000559463 HEATR3Q7Z4Q2 680 aa17.05■□□□□ 0.32
RPL28-208ENST00000559463 SMARCC2Q8TAQ2 1214 aa17.05■□□□□ 0.32
RPL28-208ENST00000559463 CUL5Q93034 780 aa17.05■□□□□ 0.32
RPL28-208ENST00000559463 EMID1Q96A84 441 aaPredicted RBP17.05■□□□□ 0.32
RPL28-208ENST00000559463 MTG1Q9BT17 334 aaPredicted RBP17.05■□□□□ 0.32
RPL28-208ENST00000559463 NAP1L2Q9ULW6 460 aaPredicted RBP17.05■□□□□ 0.32
RPL28-208ENST00000559463 TLR3O15455 904 aaKnown RBP17.04■□□□□ 0.32
RPL28-208ENST00000559463 B4GALT4O60513 344 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 TIMP1P01033 207 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 PSMA5P28066 241 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPL28-208ENST00000559463 EPHB4P54760 987 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 SP2Q02086 613 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 UBE2SQ16763 222 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 LRIT3Q3SXY7 679 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 C9orf50Q5SZB4 431 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 TYW1BQ6NUM6 668 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 PPP1R13LQ8WUF5 828 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 SEZ6LQ9BYH1 1024 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
RPL28-208ENST00000559463 PSTPIP2Q9H939 334 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 WDR81Q562E7 1941 aa17.04■□□□□ 0.32
RPL28-208ENST00000559463 TET1Q8NFU7 2136 aa17.03■□□□□ 0.32
RPL28-208ENST00000559463 KPNA6O60684 536 aa17.03■□□□□ 0.32
RPL28-208ENST00000559463 UBA1P22314 1058 aaKnown RBP17.03■□□□□ 0.32
RPL28-208ENST00000559463 ADD1P35611 737 aaKnown RBP17.03■□□□□ 0.32
RPL28-208ENST00000559463 SEMA3FQ13275 785 aa17.03■□□□□ 0.32
RPL28-208ENST00000559463 SHHQ15465 462 aa17.03■□□□□ 0.32
RPL28-208ENST00000559463 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
RPL28-208ENST00000559463 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
RPL28-208ENST00000559463 ZSWIM6Q9HCJ5 1215 aa17.03■□□□□ 0.32
RPL28-208ENST00000559463 V9GY48 417 aaPredicted RBP17.03■□□□□ 0.32
RPL28-208ENST00000559463 SORBS3O60504 671 aa17.02■□□□□ 0.32
RPL28-208ENST00000559463 FPGSQ05932 587 aa17.02■□□□□ 0.32
RPL28-208ENST00000559463 CELF3Q5SZQ8 465 aaKnown RBP17.02■□□□□ 0.32
RPL28-208ENST00000559463 MYSM1Q5VVJ2 828 aa17.02■□□□□ 0.32
RPL28-208ENST00000559463 PCNX4Q63HM2 1172 aa17.02■□□□□ 0.32
RPL28-208ENST00000559463 KCNV1Q6PIU1 500 aa17.02■□□□□ 0.32
RPL28-208ENST00000559463 PPTC7Q8NI37 304 aa17.02■□□□□ 0.32
RPL28-208ENST00000559463 KAT2BQ92831 832 aa17.02■□□□□ 0.32
RPL28-208ENST00000559463 INPP4AQ96PE3 977 aaPredicted RBP17.02■□□□□ 0.32
RPL28-208ENST00000559463 PPP1R12CQ9BZL4 782 aa17.02■□□□□ 0.32
RPL28-208ENST00000559463 TRMT13Q9NUP7 481 aaKnown RBP17.02■□□□□ 0.32
RPL28-208ENST00000559463 UMODL1Q5DID0 1318 aa17.01■□□□□ 0.31
RPL28-208ENST00000559463 STXBP3O00186 592 aa17.01■□□□□ 0.31
RPL28-208ENST00000559463 STAM2O75886 525 aa17.01■□□□□ 0.31
RPL28-208ENST00000559463 GGPS1O95749 300 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms