RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CDCA2Q69YH5 1023 aaPredicted RBP2.46□□□□□ -2.02
HIF1A-212ENST00000557538 USP53Q70EK8 1073 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 FILIP1Q7Z7B0 1213 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 DDX53Q86TM3 631 aaKnown RBP2.46□□□□□ -2.02
HIF1A-212ENST00000557538 NLGN4XQ8N0W4 816 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 ADCY4Q8NFM4 1077 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 SEC14L1Q92503 715 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 RELTQ969Z4 430 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 TSPAN17Q96FV3 270 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 CLEC1BQ9P126 229 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 WASF3Q9UPY6 502 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 IRS2Q9Y4H2 1338 aa2.46□□□□□ -2.02
HIF1A-212ENST00000557538 FAM47E-STBD1D6RA91 191 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 STXBP3O00186 592 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 ZBTB48P10074 688 aaPredicted RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 GRK2P25098 689 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 LTKP29376 864 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 GRK3P35626 688 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 DSG1Q02413 1049 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 KCNT2Q6UVM3 1135 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 WAPLQ7Z5K2 1190 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 NLRP10Q86W26 655 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 CPA5Q8WXQ8 436 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 TARS2Q9BW92 718 aaKnown RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 SLC6A20Q9NP91 592 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 GPRC5CQ9NQ84 441 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 MINPP1Q9UNW1 487 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 MSCO60682 206 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 EIF5BO60841 1220 aaKnown RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 CPEP16870 476 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 IBSPP21815 317 aaPredicted RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 FBLN1P23142 703 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 AFMP43652 599 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 KCNJ6P48051 423 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 MVKQ03426 396 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 ZP2Q05996 745 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 LRRC32Q14392 662 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 FGD2Q7Z6J4 655 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 SYTL4Q96C24 671 aaPredicted RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 ALG1Q9BT22 464 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 SMOC1Q9H4F8 434 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 YBX2Q9Y2T7 364 aaKnown RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 B3GALT1Q9Y5Z6 326 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 GPR39O43194 453 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 PDE8AO60658 829 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 PEX10O60683 326 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 ADAMTS4O75173 837 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 CRTAMO95727 393 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 WNT11O96014 354 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 RNASE1P07998 156 aaKnown RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 PRSS53Q2L4Q9 553 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 TMEM177Q53S58 311 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 FIGNQ5HY92 759 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 ABHD17CQ6PCB6 329 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 DDX46Q7L014 1031 aaKnown RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 MIB1Q86YT6 1006 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 PI4K2BQ8TCG2 481 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 PUS7LQ9H0K6 701 aaKnown RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 WNT8AQ9H1J5 351 aa2.45□□□□□ -2.02
HIF1A-212ENST00000557538 NGRNQ9NPE2 291 aaKnown RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 APOBEC2Q9Y235 224 aaKnown RBP2.45□□□□□ -2.02
HIF1A-212ENST00000557538 CCDC85CA6NKD9 419 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 SOD2P04179 222 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 CYBBP04839 570 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 LCP1P13796 627 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 JUNBP17275 347 aaPredicted RBP2.44□□□□□ -2.02
HIF1A-212ENST00000557538 CDK11BP21127 795 aaKnown RBP2.44□□□□□ -2.02
HIF1A-212ENST00000557538 GJA4P35212 333 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 HERVK_113P62684 666 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 IGBP1P78318 339 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 EXOSC10Q01780 885 aaKnown RBP2.44□□□□□ -2.02
HIF1A-212ENST00000557538 SPIRE1Q08AE8 756 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 BNIP3Q12983 259 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 MOGSQ13724 837 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 PAQR3Q6TCH7 311 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 TRIM48Q8IWZ4 208 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 FLCNQ8NFG4 579 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 LGR4Q9BXB1 951 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 ADAMTS10Q9H324 1103 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 RC3H2Q9HBD1 1191 aaKnown RBP2.44□□□□□ -2.02
HIF1A-212ENST00000557538 TCF7L1Q9HCS4 588 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 MCM8Q9UJA3 840 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 AMY2AP04746 511 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 AMY2BP19961 511 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 MAPKAPK2P49137 400 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 RTP1P59025 263 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 OCRLQ01968 901 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 DPY19L1Q2PZI1 675 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 INAVAQ3KP66 663 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 NOSTRINQ8IVI9 506 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 DHX37Q8IY37 1157 aaKnown RBP2.44□□□□□ -2.02
HIF1A-212ENST00000557538 CHST14Q8NCH0 376 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 SMC1BQ8NDV3 1235 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 SSH1Q8WYL5 1049 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 ORAI2Q96SN7 254 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 RNF38Q9H0F5 515 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 ZNF552Q9H707 407 aaPredicted RBP2.44□□□□□ -2.02
HIF1A-212ENST00000557538 ATP8A1Q9Y2Q0 1164 aa2.44□□□□□ -2.02
HIF1A-212ENST00000557538 BLACEA4D250 179 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms