RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 IL27Q8NEV9 243 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 TET1Q8NFU7 2136 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 CAGE1Q8TC20 777 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 SYTL5Q8TDW5 730 aaPredicted RBP12.45□□□□□ -0.42
PNN-203ENST00000554117 FTOQ9C0B1 505 aaKnown RBP eCLIP12.45□□□□□ -0.42
PNN-203ENST00000554117 PXMP2Q9NR77 195 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 DDX49Q9Y6V7 483 aaKnown RBP12.45□□□□□ -0.42
PNN-203ENST00000554117 COL6A3P12111 3177 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 LAMA3Q16787 3333 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 PNMA6FA0A0J9YX94 578 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 E7EWF7 191 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 NR3C2P08235 984 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 MMP3P08254 477 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 CYP21A2P08686 494 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 CALM1P0DP23 149 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 CALM2P0DP24 149 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 CALM3P0DP25 149 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 PDE4AP27815 886 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 MCM5P33992 734 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 KCNJ6P48051 423 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 GRM4Q14833 912 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 PTGISQ16647 500 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 DEFB128Q7Z7B8 93 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 STAG2Q8N3U4 1231 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 RRP36Q96EU6 259 aaKnown RBP12.44□□□□□ -0.42
PNN-203ENST00000554117 LZTS2Q9BRK4 669 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 TRMT13Q9NUP7 481 aaKnown RBP12.44□□□□□ -0.42
PNN-203ENST00000554117 MAD2L2Q9UI95 211 aa12.44□□□□□ -0.42
PNN-203ENST00000554117 LAMA2P24043 3122 aaKnown RBP12.44□□□□□ -0.42
PNN-203ENST00000554117 COL4A4P53420 1690 aaPredicted RBP12.44□□□□□ -0.42
PNN-203ENST00000554117 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
PNN-203ENST00000554117 NOP56O00567 594 aaKnown RBP12.43□□□□□ -0.42
PNN-203ENST00000554117 SGSM2O43147 1006 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 STAM2O75886 525 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 TGFB3P10600 412 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 CYP2C9P11712 490 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 HSD17B4P51659 736 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 SEC23AQ15436 765 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 LY6KQ17RY6 165 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 PPP2R2DQ66LE6 453 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 CYB5R4Q7L1T6 521 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 SMARCC2Q8TAQ2 1214 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 AFG1LQ8WV93 481 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 COPS5Q92905 334 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 SCLYQ96I15 445 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 TMEM87BQ96K49 555 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 SLC9A7Q96T83 725 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 MAP3K14Q99558 947 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 MTA3Q9BTC8 594 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 PBX4Q9BYU1 374 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 TTYH1Q9H313 450 aaPredicted RBP12.43□□□□□ -0.42
PNN-203ENST00000554117 EHMT1Q9H9B1 1298 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 MLXIPQ9HAP2 919 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 EVPLQ92817 2033 aa12.43□□□□□ -0.42
PNN-203ENST00000554117 TCF20Q9UGU0 1960 aaKnown RBP12.43□□□□□ -0.42
PNN-203ENST00000554117 GRIN2DO15399 1336 aa12.42□□□□□ -0.42
PNN-203ENST00000554117 DDAH1O94760 285 aa12.42□□□□□ -0.42
PNN-203ENST00000554117 ATP2A2P16615 1042 aaKnown RBP12.42□□□□□ -0.42
PNN-203ENST00000554117 TMEM63BQ5T3F8 832 aa12.42□□□□□ -0.42
PNN-203ENST00000554117 FCHSD1Q86WN1 690 aa12.42□□□□□ -0.42
PNN-203ENST00000554117 PPTC7Q8NI37 304 aa12.42□□□□□ -0.42
PNN-203ENST00000554117 AFAP1L1Q8TED9 768 aa12.42□□□□□ -0.42
PNN-203ENST00000554117 PIGSQ96S52 555 aa12.42□□□□□ -0.42
PNN-203ENST00000554117 DDX41Q9UJV9 622 aaKnown RBP12.42□□□□□ -0.42
PNN-203ENST00000554117 PCDHA11Q9Y5I1 949 aa12.42□□□□□ -0.42
PNN-203ENST00000554117 RBM8AQ9Y5S9 174 aaKnown RBP12.42□□□□□ -0.42
PNN-203ENST00000554117 UMODL1Q5DID0 1318 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
PNN-203ENST00000554117 EFCAB14O75071 495 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 BAIAP3O94812 1187 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 IGFBP4P22692 258 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 PTGS1P23219 599 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 PTH1RQ03431 593 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 PGM5Q15124 567 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 RASIP1Q5U651 963 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 CCDC62Q6P9F0 684 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 STOX1Q6ZVD7 989 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 ZNF654Q8IZM8 581 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 GIMAP8Q8ND71 665 aaPredicted RBP12.41□□□□□ -0.42
PNN-203ENST00000554117 TBC1D5Q92609 795 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 MAP4K1Q92918 833 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
PNN-203ENST00000554117 SPATA33Q96N06 139 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 PDCD2LQ9BRP1 358 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 ALG1Q9BT22 464 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 WNT8AQ9H1J5 351 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 RIOX1Q9H6W3 641 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 ANO2Q9NQ90 1003 aa12.41□□□□□ -0.42
PNN-203ENST00000554117 PRC1O43663 620 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 PPFIA4O75335 1185 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 ARIH2O95376 493 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 GGPS1O95749 300 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 IQCF3P0C7M6 154 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 GNAT1P11488 350 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 SMARCA1P28370 1054 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.42
PNN-203ENST00000554117 PSEN2P49810 448 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 GHRHRQ02643 423 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 ARHGAP1Q07960 439 aa12.4□□□□□ -0.42
PNN-203ENST00000554117 NEDD9Q14511 834 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms