RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 DNAJB2P25686 324 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 LIFRP42702 1097 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 EPHB4P54760 987 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 CCL23P55773 120 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 CHMP4BP1P59074 171 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 NEDD9Q14511 834 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 KRT32Q14532 448 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 NECTIN1Q15223 517 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 PTGISQ16647 500 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 TMEM63BQ5T3F8 832 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 C16orf59Q7L2K0 433 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 CHST3Q7LGC8 479 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 SESTD1Q86VW0 696 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 TEX2Q8IWB9 1127 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 ZNF654Q8IZM8 581 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 GIMAP8Q8ND71 665 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-205ENST00000553904 PPTC7Q8NI37 304 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 CAGE1Q8TC20 777 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 PHOSPHO2Q8TCD6 241 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 AFG1LQ8WV93 481 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 TIFAQ96CG3 184 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 GAS2L1Q99501 681 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-205ENST00000553904 PDCD2LQ9BRP1 358 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 ESYT1Q9BSJ8 1104 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 NOC4LQ9BVI4 516 aaKnown RBP7.53□□□□□ -1.2
FOXN3-205ENST00000553904 SPZ1Q9BXG8 430 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 USP26Q9BXU7 913 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 FTOQ9C0B1 505 aaKnown RBP eCLIP7.53□□□□□ -1.21e-6■■■□□ 14.8
FOXN3-205ENST00000553904 IL25Q9H293 177 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 ZNF576Q9H609 170 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 SLC28A3Q9HAS3 691 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 ANO2Q9NQ90 1003 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 DDX49Q9Y6V7 483 aaKnown RBP7.53□□□□□ -1.2
FOXN3-205ENST00000553904 PLXNA1Q9UIW2 1896 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 NOP56O00567 594 aaKnown RBP7.52□□□□□ -1.21
FOXN3-205ENST00000553904 SLC27A2O14975 620 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 ARIH2O95376 493 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 MMP3P08254 477 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 IQCF3P0C7M6 154 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 CYP2C9P11712 490 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 ARHGAP1Q07960 439 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 PGM5Q15124 567 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 CELF3Q5SZQ8 465 aaKnown RBP7.52□□□□□ -1.21
FOXN3-205ENST00000553904 RASIP1Q5U651 963 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 OTOP2Q7RTS6 562 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 NLRX1Q86UT6 975 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 FCHSD1Q86WN1 690 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 MB21D2Q8IYB1 491 aaPredicted RBP7.52□□□□□ -1.21
FOXN3-205ENST00000553904 AFAP1L1Q8TED9 768 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 COPS5Q92905 334 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 TNPO1Q92973 898 aaKnown RBP7.52□□□□□ -1.21
FOXN3-205ENST00000553904 CDHR1Q96JP9 859 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 SPATA33Q96N06 139 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 NEK1Q96PY6 1258 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 PSTPIP2Q9H939 334 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 EHMT1Q9H9B1 1298 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 TRMT13Q9NUP7 481 aaKnown RBP7.52□□□□□ -1.21
FOXN3-205ENST00000553904 COL20A1Q9P218 1284 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 SMCHD1A6NHR9 2005 aa7.52□□□□□ -1.21
FOXN3-205ENST00000553904 ALPK3Q96L96 1907 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 CCDC196A0A1B0GTZ2 297 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 SPDYE3A6NKU9 549 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 ZBBXA8MT70 800 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 PIK3CDO00329 1044 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 FIBPO43427 364 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 CYTH3O43739 400 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 EFCAB14O75071 495 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 BAIAP3O94812 1187 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 FOSL2P15408 326 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 ATP2A2P16615 1042 aaKnown RBP7.51□□□□□ -1.21
FOXN3-205ENST00000553904 HOXA13P31271 388 aaPredicted RBP7.51□□□□□ -1.21
FOXN3-205ENST00000553904 ICAM3P32942 547 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 FGD1P98174 961 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 MYSM1Q5VVJ2 828 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 CREB3L3Q68CJ9 461 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 FANCBQ8NB91 859 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 MAFAQ8NHW3 353 aaPredicted RBP7.51□□□□□ -1.21
FOXN3-205ENST00000553904 SYMPKQ92797 1274 aaKnown RBP7.51□□□□□ -1.21
FOXN3-205ENST00000553904 GUCD1Q96NT3 240 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 SENP7Q9BQF6 1050 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 ALG1Q9BT22 464 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 PBX4Q9BYU1 374 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 LSG1Q9H089 658 aaKnown RBP7.51□□□□□ -1.21
FOXN3-205ENST00000553904 GLT8D2Q9H1C3 349 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 TSPYL2Q9H2G4 693 aaPredicted RBP7.51□□□□□ -1.21
FOXN3-205ENST00000553904 LY9Q9HBG7 655 aa7.51□□□□□ -1.21
FOXN3-205ENST00000553904 RBM28Q9NW13 759 aaKnown RBP7.51□□□□□ -1.21
FOXN3-205ENST00000553904 FRMPD3Q5JV73 1810 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 SPATA31C2B4DYI2 1134 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 H3BRB1 525 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 SH2B2O14492 632 aaPredicted RBP7.5□□□□□ -1.21
FOXN3-205ENST00000553904 OPLAHO14841 1288 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 PPP1R11O60927 126 aaPredicted RBP7.5□□□□□ -1.21
FOXN3-205ENST00000553904 CDC45O75419 566 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 GGPS1O95749 300 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 SELPP16109 830 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 PTGS1P23219 599 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 KCNJ6P48051 423 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 PSEN2P49810 448 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 ANTXR2P58335 489 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms