RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 ZBTB48P10074 688 aaPredicted RBP9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 ALAS1P13196 640 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 LIG1P18858 919 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 HOXA13P31271 388 aaPredicted RBP9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 MAP2K2P36507 400 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 HSD17B4P51659 736 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 OAZ1P54368 228 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 HUNKP57058 714 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 ATP2C1P98194 919 aaPredicted RBP9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 GRIN1Q05586 938 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 TRAF1Q13077 416 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 GRM1Q13255 1194 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 AP3B2Q13367 1082 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 KLHL40Q2TBA0 621 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 AXDND1Q5T1B0 1012 aaPredicted RBP9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 FASTKD5Q7L8L6 764 aaKnown RBP9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 NEK8Q86SG6 692 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 SAPCD2Q86UD0 394 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 C4orf32Q8N8J7 132 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 KCNG4Q8TDN1 519 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 CRYGNQ8WXF5 182 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 GLT8D2Q9H1C3 349 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 TMEM60Q9H2L4 133 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 GOLPH3LQ9H4A5 285 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 HOXC10Q9NYD6 342 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 FBXO2Q9UK22 296 aaPredicted RBP9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 DDX49Q9Y6V7 483 aaKnown RBP9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 KIAA1217Q5T5P2 1943 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 CCL15-CCL14A0A0B4J2E2 113 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 CA12O43570 354 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 TDP2O95551 362 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 CFBP00751 764 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 CETPP11597 493 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 MCM7P33993 719 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 ME1P48163 572 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 GTF2A2P52657 109 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 HERVK_113P62684 666 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 IRX3P78415 501 aaPredicted RBP9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 PTGDRQ13258 359 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 CCL15Q16663 113 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 LETM2Q2VYF4 491 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 SNRNP48Q6IEG0 339 aaKnown RBP9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 SLC30A10Q6XR72 485 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 CLIC6Q96NY7 704 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 TRERF1Q96PN7 1200 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 TXNRD2Q9NNW7 524 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 HOMER2Q9NSB8 354 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 RNF146Q9NTX7 359 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 COL20A1Q9P218 1284 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 CTDP1Q9Y5B0 961 aaPredicted RBP9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 TLL2Q9Y6L7 1015 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 LRRC37A2A6NM11 1700 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 PLXNB2O15031 1838 aa9.21□□□□□ -0.94
DEPDC4-207ENST00000549249 FAM155AB1AL88 458 aaPredicted RBP9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 GCOM1H8Y6P7 765 aaPredicted RBP9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 SLC37A4O43826 429 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 BMP15O95972 392 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 MBD3O95983 291 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 SLC10A3P09131 477 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 POLR2MP0CAP2 368 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 HSPA8P11142 646 aaKnown RBP9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 SREBF1P36956 1147 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 ARHGAP4P98171 946 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 IL17AQ16552 155 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 ADALQ6DHV7 355 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 CYP4F22Q6NT55 531 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 RGMBQ6NW40 437 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 SHC4Q6S5L8 630 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 ANKRD23Q86SG2 305 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 FCHSD1Q86WN1 690 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 TEX2Q8IWB9 1127 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 FAM43AQ8N2R8 423 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 MB21D1Q8N884 522 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 HHIPL1Q96JK4 782 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 MBOAT7Q96N66 472 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 PTPN18Q99952 460 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 TEX13BQ9BXU2 312 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 R3HDMLQ9H3Y0 253 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 TMEM63CQ9P1W3 806 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 RBPJLQ9UBG7 517 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 PNMA2Q9UL42 364 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 CEP131Q9UPN4 1083 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 SLC45A1Q9Y2W3 748 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 MCM3APO60318 1980 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 FRMPD4Q14CM0 1322 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 RPTORQ8N122 1335 aa9.2□□□□□ -0.94
DEPDC4-207ENST00000549249 PLXNA1Q9UIW2 1896 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 DOCK3Q8IZD9 2030 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 A0A1W2PQ27 194 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 A0A1W2PQ64 194 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 A0A1W2PQD8 194 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 TESPA1A2RU30 521 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 SPDYE3A6NKU9 549 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 PDHXO00330 501 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 CCNT1O60563 726 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 CUTAO60888 179 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 FOSP01100 380 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 CYP2C8P10632 490 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms