RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 POTEEQ6S8J3 1075 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 PPEF1O14829 653 aaPredicted RBP15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 HLA-DOAP06340 250 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 TRIM14Q14142 442 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 ECM1Q16610 540 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 GPBP1Q86WP2 473 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 CCSER1Q9C0I3 900 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 SH3GLB2Q9NR46 395 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 SEPT11Q9NVA2 429 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 NID2Q14112 1375 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 GPR75-ASB3A0A0A6YYF3 556 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 MAGEA1P43355 309 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 HDXQ7Z353 690 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 FAM114A1Q8IWE2 563 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 SLF2Q8IX21 1173 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 TSG101Q99816 390 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 BCAS3Q9H6U6 928 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 PANK4Q9NVE7 773 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 ADAM21Q9UKJ8 722 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 PAPPAQ13219 1627 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 FTCDO95954 541 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 NOP2P46087 812 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 CASP8Q14790 479 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 CERS5Q8N5B7 392 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 IFT81Q8WYA0 676 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 THAP9Q9H5L6 903 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 HAUS4Q9H6D7 363 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 JMJD4Q9H9V9 463 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 CAPN6Q9Y6Q1 641 aa15.17■□□□□ 0.02
PRPF40B-209ENST00000548825 BCL9LQ86UU0 1499 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 CCDC151A5D8V7 595 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 TTLL1O95922 423 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 DDR1Q08345 913 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 RDH13Q8NBN7 331 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 DHTKD1Q96HY7 919 aaPredicted RBP15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 ESYT3A0FGR9 886 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 TMCO5BA8MYB1 307 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 DDX39AO00148 427 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 CLIC2O15247 247 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 SEPT2Q15019 361 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 COG1Q8WTW3 980 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 CUL5Q93034 780 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 MS4A14Q96JA4 679 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 SH2D3AQ9BRG2 576 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 LSM14BQ9BX40 385 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 CAPN11Q9UMQ6 739 aa15.16■□□□□ 0.02
PRPF40B-209ENST00000548825 EIF3JO75822 258 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 KIF11P52732 1056 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 VPS72Q15906 364 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 SPZ1Q9BXG8 430 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 IKZF4Q9H2S9 585 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 BLOC1S4Q9NUP1 217 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 SRGNP10124 158 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 MRPL12P52815 198 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 FAM26FQ5R3K3 315 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 CCDC84Q86UT8 332 aaPredicted RBP15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 PNMA5Q96PV4 448 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 ZBTB21Q9ULJ3 1066 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 ROBO1Q9Y6N7 1651 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 CLRN2A0PK11 232 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 VWA3BQ502W6 1294 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 MYOCDQ8IZQ8 938 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 FAM133AQ8N9E0 248 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 HDAC7Q8WUI4 952 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 LZTS2Q9BRK4 669 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 ADAMTS1Q9UHI8 967 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 PCDHB13Q9Y5F0 798 aa15.15■□□□□ 0.02
PRPF40B-209ENST00000548825 LRRC10BA6NIK2 292 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 LRRIQ3A6PVS8 624 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 PPP1R11O60927 126 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 CFBP00751 764 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 ACTN1P12814 892 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 PPP4CP60510 307 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 ZBED6P86452 979 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 RC3H1Q5TC82 1133 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 CCDC174Q6PII3 467 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 PDS5AQ29RF7 1337 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 CACNA1SQ13698 1873 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 PDE2AO00408 941 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 TACC1O75410 805 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 EEF2P13639 858 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 QRICH1Q2TAL8 776 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 SND1Q7KZF4 910 aaKnown RBP eCLIP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 KSR1Q8IVT5 923 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 CYP2W1Q8TAV3 490 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 PIGOQ8TEQ8 1089 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 SPAG5Q96R06 1193 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 ITIH6Q6UXX5 1313 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 WHAMMP3Q1A5X7 153 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 BEND6Q5SZJ8 279 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 TAF3Q5VWG9 929 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 CDC42EP5Q6NZY7 148 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 TEKT1Q969V4 418 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 TDRD3Q9H7E2 651 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 RSPH14Q9UHP6 348 aa15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.14■□□□□ 0.01
PRPF40B-209ENST00000548825 M0R2N6 131 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms