RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 NR3C2P08235 984 aa13.25□□□□□ -0.29
C1RL-209ENST00000543941 MMP3P08254 477 aa13.25□□□□□ -0.29
C1RL-209ENST00000543941 NT5C2P49902 561 aa13.25□□□□□ -0.29
C1RL-209ENST00000543941 CPT1AP50416 773 aa13.25□□□□□ -0.29
C1RL-209ENST00000543941 NSUN6Q8TEA1 469 aaKnown RBP13.25□□□□□ -0.29
C1RL-209ENST00000543941 DHX38Q92620 1227 aaKnown RBP13.25□□□□□ -0.29
C1RL-209ENST00000543941 TIFAQ96CG3 184 aa13.25□□□□□ -0.29
C1RL-209ENST00000543941 PDCD2LQ9BRP1 358 aa13.25□□□□□ -0.29
C1RL-209ENST00000543941 LSG1Q9H089 658 aaKnown RBP13.25□□□□□ -0.29
C1RL-209ENST00000543941 PNMA2Q9UL42 364 aa13.25□□□□□ -0.29
C1RL-209ENST00000543941 MRPL11Q9Y3B7 192 aaKnown RBP13.25□□□□□ -0.29
C1RL-209ENST00000543941 TMEM265A0A087WTH1 108 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 IFIT3O14879 490 aaKnown RBP13.24□□□□□ -0.29
C1RL-209ENST00000543941 DHX16O60231 1041 aaKnown RBP13.24□□□□□ -0.29
C1RL-209ENST00000543941 SORBS3O60504 671 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 GDF6Q6KF10 455 aaPredicted RBP13.24□□□□□ -0.29
C1RL-209ENST00000543941 PSRC1Q6PGN9 363 aaPredicted RBP13.24□□□□□ -0.29
C1RL-209ENST00000543941 HOMER1Q86YM7 354 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 WNT8BQ93098 351 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 MYL10Q9BUA6 226 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 AMNQ9BXJ7 453 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 NKX2-4Q9H2Z4 354 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 PRDM12Q9H4Q4 367 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 PCDHA1Q9Y5I3 950 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 RBM8AQ9Y5S9 174 aaKnown RBP13.24□□□□□ -0.29
C1RL-209ENST00000543941 CHD7Q9P2D1 2997 aa13.24□□□□□ -0.29
C1RL-209ENST00000543941 IQCF3P0C7M6 154 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 FOSL2P15408 326 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 ZNF200P98182 395 aaPredicted RBP13.23□□□□□ -0.29
C1RL-209ENST00000543941 PGM5Q15124 567 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 STXBP2Q15833 593 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 FAM47CQ5HY64 1035 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 NFRKBQ6P4R8 1299 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 SPRED2Q7Z698 418 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 DEFB128Q7Z7B8 93 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 MCF2L2Q86YR7 1114 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 IWS1Q96ST2 819 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 SEZ6LQ9BYH1 1024 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 MAF1Q9H063 256 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 LY9Q9HBG7 655 aa13.23□□□□□ -0.29
C1RL-209ENST00000543941 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
C1RL-209ENST00000543941 HAS3O00219 553 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 EIF3JO75822 258 aaKnown RBP13.22□□□□□ -0.29
C1RL-209ENST00000543941 GH1P01241 217 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 MYCLP12524 364 aaPredicted RBP13.22□□□□□ -0.29
C1RL-209ENST00000543941 MRPS9P82933 396 aaKnown RBP13.22□□□□□ -0.29
C1RL-209ENST00000543941 SEMA3FQ13275 785 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 TRAF7Q6Q0C0 670 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 VSIG10LQ86VR7 867 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 NCOA7Q8NI08 942 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 PIBF1Q8WXW3 757 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 OSBPL7Q9BZF2 842 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 HDAC6Q9UBN7 1215 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 REV3LO60673 3130 aa13.22□□□□□ -0.29
C1RL-209ENST00000543941 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.29
C1RL-209ENST00000543941 ZNF286BP0CG31 522 aa13.21□□□□□ -0.29
C1RL-209ENST00000543941 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
C1RL-209ENST00000543941 CHMP4BP1P59074 171 aa13.21□□□□□ -0.29
C1RL-209ENST00000543941 WTAPQ15007 396 aa13.21□□□□□ -0.29
C1RL-209ENST00000543941 NECTIN1Q15223 517 aa13.21□□□□□ -0.29
C1RL-209ENST00000543941 TRIM71Q2Q1W2 868 aaKnown RBP13.21□□□□□ -0.29
C1RL-209ENST00000543941 HSDL1Q3SXM5 330 aa13.21□□□□□ -0.29
C1RL-209ENST00000543941 MYSM1Q5VVJ2 828 aa13.21□□□□□ -0.29
C1RL-209ENST00000543941 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.29
C1RL-209ENST00000543941 CMTR1Q8N1G2 835 aaKnown RBP13.21□□□□□ -0.29
C1RL-209ENST00000543941 RUFY2Q8WXA3 655 aa13.21□□□□□ -0.29
C1RL-209ENST00000543941 EMID1Q96A84 441 aaPredicted RBP13.21□□□□□ -0.29
C1RL-209ENST00000543941 PNMA6FA0A0J9YX94 578 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 EPOPA6NHQ4 379 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 RFXAPO00287 272 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 SLC27A2O14975 620 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 KPNA6O60684 536 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 RXRAP19793 462 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 PSEN2P49810 448 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 PTPN11Q06124 597 aaPredicted RBP13.2□□□□□ -0.3
C1RL-209ENST00000543941 TMEM67Q5HYA8 995 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 TMCO2Q7Z6W1 182 aaPredicted RBP13.2□□□□□ -0.3
C1RL-209ENST00000543941 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 FCHSD1Q86WN1 690 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 SRBD1Q8N5C6 995 aaKnown RBP13.2□□□□□ -0.3
C1RL-209ENST00000543941 ESYT1Q9BSJ8 1104 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 C16orf70Q9BSU1 422 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 LRRC2Q9BYS8 371 aa13.2□□□□□ -0.3
C1RL-209ENST00000543941 FRMPD4Q14CM0 1322 aa13.19□□□□□ -0.3
C1RL-209ENST00000543941 B4DLN1 442 aa13.19□□□□□ -0.3
C1RL-209ENST00000543941 SH2B2O14492 632 aaPredicted RBP13.19□□□□□ -0.3
C1RL-209ENST00000543941 MEIS2O14770 477 aa13.19□□□□□ -0.3
C1RL-209ENST00000543941 NBNO60934 754 aa13.19□□□□□ -0.3
C1RL-209ENST00000543941 UBA1P22314 1058 aaKnown RBP13.19□□□□□ -0.3
C1RL-209ENST00000543941 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
C1RL-209ENST00000543941 TRDNQ13061 729 aa13.19□□□□□ -0.3
C1RL-209ENST00000543941 MBTPS1Q14703 1052 aa13.19□□□□□ -0.3
C1RL-209ENST00000543941 PTGISQ16647 500 aa13.19□□□□□ -0.3
C1RL-209ENST00000543941 CELF3Q5SZQ8 465 aaKnown RBP13.19□□□□□ -0.3
C1RL-209ENST00000543941 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
C1RL-209ENST00000543941 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
C1RL-209ENST00000543941 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms