RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 PRPF38AQ8NAV1 312 aaKnown RBP17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 BLZF1Q9H2G9 400 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 AS3MTQ9HBK9 375 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 TMEM51Q9NW97 253 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 MAN1B1Q9UKM7 699 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 POTEMA6NI47 508 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 USP2O75604 605 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 BMP6P22004 513 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 TPM4P67936 248 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 ARHGAP4P98171 946 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 FANCCQ00597 558 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 ORC2Q13416 577 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 PDXDC2PQ6P474 469 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 KRT26Q7Z3Y9 468 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 CCPG1Q9ULG6 757 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 PARP14Q460N5 1801 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 NRDCO43847 1150 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 MARCH6O60337 910 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 PLA2G4AP47712 749 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 USP14P54578 494 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 CABP7Q86V35 215 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 ZNF536O15090 1300 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 RRAGBQ5VZM2 374 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 SH3RF1Q7Z6J0 888 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 HAS1Q92839 578 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 CCDC34Q96HJ3 373 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 MTRQ99707 1265 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 WDR18Q9BV38 432 aa17.12■□□□□ 0.33
CLPTM1-202ENST00000541297 COL11A1P12107 1806 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 OTOFQ9HC10 1997 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 EPHX2P34913 555 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 LRRC15Q8TF66 581 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 UBXN4Q92575 508 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 HSD3B7Q9H2F3 369 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 RAVER2Q9HCJ3 691 aaKnown RBP17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 FANCGO15287 622 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 TUBB4AP04350 444 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 UBXN2AP68543 259 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 EAPPQ56P03 285 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 NAALADL2Q58DX5 795 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 WNK4Q96J92 1243 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 AK8Q96MA6 479 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 CCSER1Q9C0I3 900 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 LRWD1Q9UFC0 647 aa17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 MRPL11Q9Y3B7 192 aaKnown RBP17.11■□□□□ 0.33
CLPTM1-202ENST00000541297 CYP2C19P33261 490 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 SARSP49591 514 aaKnown RBP17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 USP11P51784 963 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 FAM193AP78312 1265 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 CUL4BQ13620 913 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 VGLL4Q14135 290 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 PRR16Q569H4 304 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 TRIM65Q6PJ69 517 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 GCOM1H8Y6P7 765 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 ZRANB2O95218 330 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 FOSP01100 380 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 ICAM1P05362 532 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 POLR2MP0CAP2 368 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 GCFC2P16383 781 aaKnown RBP17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 PLCG1P19174 1290 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 DPYDQ12882 1025 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 TRAF1Q13077 416 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 CRYGNQ8WXF5 182 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 MMTAG2Q9BU76 263 aaKnown RBP17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
CLPTM1-202ENST00000541297 FAM86B1E9PN63 330 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 URI1O94763 535 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 FAM86B2P0C5J1 330 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 ALAS1P13196 640 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 SREBF1P36956 1147 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 IRX5P78411 483 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 PLCD3Q8N3E9 789 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 CYP2W1Q8TAV3 490 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 PYM1Q9BRP8 204 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 PPP1R9AQ9ULJ8 1098 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 NFIBO00712 420 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 TMCO3Q6UWJ1 677 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 SPATA20Q8TB22 786 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 L3MBTL3Q96JM7 780 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 SLC38A10Q9HBR0 1119 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 CALCOCO1Q9P1Z2 691 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 ABCB11O95342 1321 aa17.09■□□□□ 0.33
CLPTM1-202ENST00000541297 WDR90Q96KV7 1748 aa17.08■□□□□ 0.33
CLPTM1-202ENST00000541297 UBASH3AP57075 661 aa17.08■□□□□ 0.33
CLPTM1-202ENST00000541297 MORC3Q14149 939 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms