RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 LCA5Q86VQ0 697 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 DZIP1Q86YF9 867 aaKnown RBP13.98□□□□□ -0.17
DDX55-206ENST00000539934 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 PLPP6Q8IY26 295 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 RNF168Q8IYW5 571 aaPredicted RBP13.98□□□□□ -0.17
DDX55-206ENST00000539934 ZFAND2BQ8WV99 257 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 SPIRE2Q8WWL2 714 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 ALS2CR12Q96Q35 445 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 UIMC1Q96RL1 719 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 PAGR1Q9BTK6 254 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 AGXT2Q9BYV1 514 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 TTC12Q9H892 705 aaPredicted RBP13.98□□□□□ -0.17
DDX55-206ENST00000539934 C6orf203Q9P0P8 240 aaPredicted RBP13.98□□□□□ -0.17
DDX55-206ENST00000539934 CYP7A1P22680 504 aa13.97□□□□□ -0.17
DDX55-206ENST00000539934 LMAN1P49257 510 aa13.97□□□□□ -0.17
DDX55-206ENST00000539934 NAA30Q147X3 362 aaPredicted RBP13.97□□□□□ -0.17
DDX55-206ENST00000539934 TMC4Q7Z404 712 aa13.97□□□□□ -0.17
DDX55-206ENST00000539934 IFNL3Q8IZI9 196 aa13.97□□□□□ -0.17
DDX55-206ENST00000539934 TUBA8Q9NY65 449 aaPredicted RBP13.97□□□□□ -0.17
DDX55-206ENST00000539934 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.97□□□□□ -0.177e-7■■□□□ 13.9
DDX55-206ENST00000539934 ATP6V1DQ9Y5K8 247 aa13.97□□□□□ -0.17
DDX55-206ENST00000539934 PRC1O43663 620 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 USP17L8P0C7I0 530 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 CLK1P49759 484 aaKnown RBP13.96□□□□□ -0.17
DDX55-206ENST00000539934 RCN1Q15293 331 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 AGAP9Q5VTM2 703 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 GIMAP6Q6P9H5 292 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 MTHFD1LQ6UB35 978 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 MB21D2Q8IYB1 491 aaPredicted RBP13.96□□□□□ -0.17
DDX55-206ENST00000539934 LCORLQ8N3X6 602 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 SCYL1Q96KG9 808 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 PARD6BQ9BYG5 372 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 NACAP1Q9BZK3 213 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 SLC4A4Q9Y6R1 1079 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 ZMYM6O95789 1325 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 PFKFB2O60825 505 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 ALX1Q15699 326 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 PKN2Q16513 984 aaKnown RBP13.96□□□□□ -0.17
DDX55-206ENST00000539934 GNPTABQ3T906 1256 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 COBLL1Q53SF7 1204 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 FBXO46Q6PJ61 603 aaPredicted RBP13.96□□□□□ -0.17
DDX55-206ENST00000539934 CUL5Q93034 780 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 SPDL1Q96EA4 605 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 VMP1Q96GC9 406 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 TFIP11Q9UBB9 837 aaKnown RBP13.96□□□□□ -0.17
DDX55-206ENST00000539934 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 GGA1Q9UJY5 639 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 MTMR6Q9Y217 621 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 SPO11Q9Y5K1 396 aa13.96□□□□□ -0.17
DDX55-206ENST00000539934 OAS2P29728 719 aaKnown RBP13.95□□□□□ -0.18
DDX55-206ENST00000539934 ZNF280AP59817 542 aaPredicted RBP13.95□□□□□ -0.18
DDX55-206ENST00000539934 SMUG1Q53HV7 270 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 CEP135Q66GS9 1140 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 TMC6Q7Z403 805 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 NUP133Q8WUM0 1156 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 EPB41L4AQ9HCS5 686 aaPredicted RBP13.95□□□□□ -0.18
DDX55-206ENST00000539934 ADAM21Q9UKJ8 722 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 TMCC3Q9ULS5 477 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 LEMD3Q9Y2U8 911 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 TRIM17Q9Y577 477 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 XDHP47989 1333 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 MAGEB6P1A0A0J9YX57 407 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 MYCP01106 439 aaPredicted RBP13.95□□□□□ -0.18
DDX55-206ENST00000539934 BTG3Q14201 252 aaPredicted RBP13.95□□□□□ -0.18
DDX55-206ENST00000539934 IQCEQ6IPM2 695 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 NAA16Q6N069 864 aaPredicted RBP13.95□□□□□ -0.18
DDX55-206ENST00000539934 TLDC1Q6P9B6 456 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 TBC1D10CQ8IV04 446 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 FBXL16Q8N461 479 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 ZNF274Q96GC6 653 aaPredicted RBP13.95□□□□□ -0.18
DDX55-206ENST00000539934 CDK5RAP3Q96JB5 506 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 DHX36Q9H2U1 1008 aaKnown RBP13.95□□□□□ -0.18
DDX55-206ENST00000539934 PCDHGC5Q9Y5F6 944 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 SLC30A1Q9Y6M5 507 aa13.95□□□□□ -0.18
DDX55-206ENST00000539934 GSG1L2A8MUP6 293 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 PRKAB2O43741 272 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 JAK2O60674 1132 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 RPSAP08865 295 aaKnown RBP13.94□□□□□ -0.18
DDX55-206ENST00000539934 NEK2P51955 445 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 CSE1LP55060 971 aaKnown RBP13.94□□□□□ -0.18
DDX55-206ENST00000539934 WASHC5Q12768 1159 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 ADGRA1Q86SQ6 560 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 LLPHQ9BRT6 129 aaKnown RBP13.94□□□□□ -0.18
DDX55-206ENST00000539934 MUC3BQ9H195 1237 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 PDS5AQ29RF7 1337 aaKnown RBP13.94□□□□□ -0.18
DDX55-206ENST00000539934 WDR19Q8NEZ3 1342 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 PABPN1LA6NDY0 278 aaKnown RBP13.94□□□□□ -0.18
DDX55-206ENST00000539934 FKTNO75072 461 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 RNF8O76064 485 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 KCNB1Q14721 858 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 MYBPC3Q14896 1274 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 TXNRD3Q86VQ6 643 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 CCDC170Q8IYT3 715 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 GMLQ99445 158 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 OSBPL10Q9BXB5 764 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 ARGLU1Q9NWB6 273 aaPredicted RBP13.94□□□□□ -0.18
DDX55-206ENST00000539934 GABBR1Q9UBS5 961 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 CROTQ9UKG9 612 aa13.94□□□□□ -0.18
DDX55-206ENST00000539934 VCANP13611 3396 aa13.93□□□□□ -0.18
DDX55-206ENST00000539934 EN2P19622 333 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms