RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 SORBS3O60504 671 aa20.1■□□□□ 0.81
PDCD2-207ENST00000539212 GH1P01241 217 aa20.1■□□□□ 0.81
PDCD2-207ENST00000539212 ATP2A2P16615 1042 aaKnown RBP20.1■□□□□ 0.81
PDCD2-207ENST00000539212 PTH1RQ03431 593 aa20.1■□□□□ 0.81
PDCD2-207ENST00000539212 ARHGEF16Q5VV41 709 aa20.1■□□□□ 0.81
PDCD2-207ENST00000539212 PPP2R2DQ66LE6 453 aa20.1■□□□□ 0.81
PDCD2-207ENST00000539212 MCF2L2Q86YR7 1114 aa20.1■□□□□ 0.81
PDCD2-207ENST00000539212 KAT2BQ92831 832 aa20.1■□□□□ 0.81
PDCD2-207ENST00000539212 PXMP2Q9NR77 195 aa20.1■□□□□ 0.81
PDCD2-207ENST00000539212 MAD2L2Q9UI95 211 aa20.1■□□□□ 0.81
PDCD2-207ENST00000539212 KLRF2D3W0D1 207 aa20.09■□□□□ 0.81
PDCD2-207ENST00000539212 KPNA6O60684 536 aa20.09■□□□□ 0.81
PDCD2-207ENST00000539212 IQCF3P0C7M6 154 aa20.09■□□□□ 0.81
PDCD2-207ENST00000539212 STXBP2Q15833 593 aa20.09■□□□□ 0.81
PDCD2-207ENST00000539212 GDF6Q6KF10 455 aaPredicted RBP20.09■□□□□ 0.81
PDCD2-207ENST00000539212 ZFP91Q96JP5 570 aaPredicted RBP20.09■□□□□ 0.81
PDCD2-207ENST00000539212 AMNQ9BXJ7 453 aa20.09■□□□□ 0.81
PDCD2-207ENST00000539212 DDX41Q9UJV9 622 aaKnown RBP20.09■□□□□ 0.81
PDCD2-207ENST00000539212 NOD1Q9Y239 953 aa20.09■□□□□ 0.81
PDCD2-207ENST00000539212 SUPT16HQ9Y5B9 1047 aaKnown RBP20.09■□□□□ 0.81
PDCD2-207ENST00000539212 PCDHA11Q9Y5I1 949 aa20.09■□□□□ 0.81
PDCD2-207ENST00000539212 ARHGEF15O94989 841 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 PFKMP08237 780 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 CYP21A2P08686 494 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 ZNF286BP0CG31 522 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 HOXA13P31271 388 aaPredicted RBP20.08■□□□□ 0.81
PDCD2-207ENST00000539212 HSD17B4P51659 736 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 PTPN11Q06124 597 aaPredicted RBP20.08■□□□□ 0.81
PDCD2-207ENST00000539212 PTGISQ16647 500 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 HOMER1Q86YM7 354 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 IL31RAQ8NI17 732 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 DHX38Q92620 1227 aaKnown RBP20.08■□□□□ 0.81
PDCD2-207ENST00000539212 IWS1Q96ST2 819 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 CERS4Q9HA82 394 aa20.08■□□□□ 0.81
PDCD2-207ENST00000539212 PALM3A6NDB9 673 aaPredicted RBP20.07■□□□□ 0.8
PDCD2-207ENST00000539212 RFXAPO00287 272 aa20.07■□□□□ 0.8
PDCD2-207ENST00000539212 PITPNM1O00562 1244 aa20.07■□□□□ 0.8
PDCD2-207ENST00000539212 RGS20O76081 388 aa20.07■□□□□ 0.8
PDCD2-207ENST00000539212 CA3P07451 260 aa20.07■□□□□ 0.8
PDCD2-207ENST00000539212 NR3C2P08235 984 aa20.07■□□□□ 0.8
PDCD2-207ENST00000539212 MYCLP12524 364 aaPredicted RBP20.07■□□□□ 0.8
PDCD2-207ENST00000539212 STOX1Q6ZVD7 989 aa20.07■□□□□ 0.8
PDCD2-207ENST00000539212 RETREG2Q8NC44 543 aa20.07■□□□□ 0.8
PDCD2-207ENST00000539212 MTMR8Q96EF0 704 aa20.07■□□□□ 0.8
PDCD2-207ENST00000539212 FTOQ9C0B1 505 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDCD2-207ENST00000539212 MRVI1Q9Y6F6 885 aa20.07■□□□□ 0.8
PDCD2-207ENST00000539212 ZBTB5O15062 677 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 CHMLP26374 656 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 RFC2P35250 354 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 GRM4Q14833 912 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 TJAP1Q5JTD0 557 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 MICALL1Q8N3F8 863 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 GPKOWQ92917 476 aaPredicted RBP eCLIP20.06■□□□□ 0.81e-6■□□□□ 11.3
PDCD2-207ENST00000539212 PIGSQ96S52 555 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 ALG1Q9BT22 464 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 MAF1Q9H063 256 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 PCDHA1Q9Y5I3 950 aa20.06■□□□□ 0.8
PDCD2-207ENST00000539212 TCF20Q9UGU0 1960 aaKnown RBP20.06■□□□□ 0.8
PDCD2-207ENST00000539212 EPOPA6NHQ4 379 aa20.05■□□□□ 0.8
PDCD2-207ENST00000539212 EIF3JO75822 258 aaKnown RBP20.05■□□□□ 0.8
PDCD2-207ENST00000539212 ACTN1P12814 892 aa20.05■□□□□ 0.8
PDCD2-207ENST00000539212 GHRHRQ02643 423 aa20.05■□□□□ 0.8
PDCD2-207ENST00000539212 BFSP2Q13515 415 aa20.05■□□□□ 0.8
PDCD2-207ENST00000539212 GPNMBQ14956 572 aa20.05■□□□□ 0.8
PDCD2-207ENST00000539212 TCTN1Q2MV58 587 aa20.05■□□□□ 0.8
PDCD2-207ENST00000539212 SPRED2Q7Z698 418 aa20.05■□□□□ 0.8
PDCD2-207ENST00000539212 TMCO2Q7Z6W1 182 aaPredicted RBP20.05■□□□□ 0.8
PDCD2-207ENST00000539212 PDCD2LQ9BRP1 358 aa20.05■□□□□ 0.8
PDCD2-207ENST00000539212 HDAC6Q9UBN7 1215 aa20.05■□□□□ 0.8
PDCD2-207ENST00000539212 IFIT3O14879 490 aaKnown RBP20.04■□□□□ 0.8
PDCD2-207ENST00000539212 CYTH3O43739 400 aa20.04■□□□□ 0.8
PDCD2-207ENST00000539212 CASTP20810 708 aaKnown RBP20.04■□□□□ 0.8
PDCD2-207ENST00000539212 PSEN2P49810 448 aa20.04■□□□□ 0.8
PDCD2-207ENST00000539212 PGM5Q15124 567 aa20.04■□□□□ 0.8
PDCD2-207ENST00000539212 DGKDQ16760 1214 aa20.04■□□□□ 0.8
PDCD2-207ENST00000539212 TMEM67Q5HYA8 995 aa20.04■□□□□ 0.8
PDCD2-207ENST00000539212 SESTD1Q86VW0 696 aa20.04■□□□□ 0.8
PDCD2-207ENST00000539212 WNT8BQ93098 351 aa20.04■□□□□ 0.8
PDCD2-207ENST00000539212 THEGQ9P2T0 379 aa20.04■□□□□ 0.8
PDCD2-207ENST00000539212 GTF2IRD1Q9UHL9 959 aa20.04■□□□□ 0.8
PDCD2-207ENST00000539212 E7EWF7 191 aa20.03■□□□□ 0.8
PDCD2-207ENST00000539212 ANTXR2P58335 489 aa20.03■□□□□ 0.8
PDCD2-207ENST00000539212 ZNF200P98182 395 aaPredicted RBP20.03■□□□□ 0.8
PDCD2-207ENST00000539212 TRDNQ13061 729 aa20.03■□□□□ 0.8
PDCD2-207ENST00000539212 HIC1Q14526 733 aa20.03■□□□□ 0.8
PDCD2-207ENST00000539212 MFSD10Q14728 455 aa20.03■□□□□ 0.8
PDCD2-207ENST00000539212 LRRC8DQ7L1W4 858 aa20.03■□□□□ 0.8
PDCD2-207ENST00000539212 HERC6Q8IVU3 1022 aa20.03■□□□□ 0.8
PDCD2-207ENST00000539212 DHX37Q8IY37 1157 aaKnown RBP20.03■□□□□ 0.8
PDCD2-207ENST00000539212 PIBF1Q8WXW3 757 aa20.03■□□□□ 0.8
PDCD2-207ENST00000539212 EMID1Q96A84 441 aaPredicted RBP20.03■□□□□ 0.8
PDCD2-207ENST00000539212 SLC9A7Q96T83 725 aa20.03■□□□□ 0.8
PDCD2-207ENST00000539212 MICAL3Q7RTP6 2002 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 F2P00734 622 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 SP2Q02086 613 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 KIAA0753Q2KHM9 967 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 HSDL1Q3SXM5 330 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 KRT40Q6A162 431 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 FCHSD1Q86WN1 690 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 C7orf31Q8N865 590 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms