RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 SYTL5Q8TDW5 730 aaPredicted RBP20.58■□□□□ 0.89
LTBR-206ENST00000536876 HLA-CQ95604 372 aa20.58■□□□□ 0.89
LTBR-206ENST00000536876 PNMA2Q9UL42 364 aa20.58■□□□□ 0.89
LTBR-206ENST00000536876 NOD1Q9Y239 953 aa20.58■□□□□ 0.89
LTBR-206ENST00000536876 DOCK5Q9H7D0 1870 aa20.58■□□□□ 0.88
LTBR-206ENST00000536876 MKRN4PQ13434 485 aaPredicted RBP20.57■□□□□ 0.88
LTBR-206ENST00000536876 CDC37Q16543 378 aaPredicted RBP20.57■□□□□ 0.88
LTBR-206ENST00000536876 MCMDC2Q4G0Z9 681 aa20.57■□□□□ 0.88
LTBR-206ENST00000536876 SEPT14Q6ZU15 432 aa20.57■□□□□ 0.88
LTBR-206ENST00000536876 TTC14Q96N46 770 aa20.57■□□□□ 0.88
LTBR-206ENST00000536876 ZKSCAN3Q9BRR0 538 aa20.57■□□□□ 0.88
LTBR-206ENST00000536876 UBA5Q9GZZ9 404 aa20.57■□□□□ 0.88
LTBR-206ENST00000536876 GTF2IRD1Q9UHL9 959 aa20.57■□□□□ 0.88
LTBR-206ENST00000536876 CCDC171Q6TFL3 1326 aa20.56■□□□□ 0.88
LTBR-206ENST00000536876 MUC6Q6W4X9 2439 aa20.56■□□□□ 0.88
LTBR-206ENST00000536876 KIF28PB7ZC32 967 aa20.56■□□□□ 0.88
LTBR-206ENST00000536876 GH1P01241 217 aa20.56■□□□□ 0.88
LTBR-206ENST00000536876 CKBP12277 381 aa20.56■□□□□ 0.88
LTBR-206ENST00000536876 KCNJ6P48051 423 aa20.56■□□□□ 0.88
LTBR-206ENST00000536876 HIC1Q14526 733 aa20.56■□□□□ 0.88
LTBR-206ENST00000536876 CNKSR3Q6P9H4 555 aa20.56■□□□□ 0.88
LTBR-206ENST00000536876 MPHOSPH6Q99547 160 aaKnown RBP20.56■□□□□ 0.88
LTBR-206ENST00000536876 HDAC6Q9UBN7 1215 aa20.56■□□□□ 0.88
LTBR-206ENST00000536876 GJB5O95377 273 aa20.55■□□□□ 0.88
LTBR-206ENST00000536876 CCDC155Q8N6L0 562 aa20.55■□□□□ 0.88
LTBR-206ENST00000536876 SUGCTQ9HAC7 445 aa20.55■□□□□ 0.88
LTBR-206ENST00000536876 MTUS1Q9ULD2 1270 aa20.55■□□□□ 0.88
LTBR-206ENST00000536876 COL4A6Q14031 1691 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 ABCB11O95342 1321 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 RALGAPA2Q2PPJ7 1873 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 LINC01553A4QN01 128 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 FAM86C2PA6NEL3 165 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 HAS3O00219 553 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 OPLAHO14841 1288 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 F2P00734 622 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 ZNF286BP0CG31 522 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 ERVK-21P61565 698 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 GPATCH4Q5T3I0 446 aaKnown RBP20.54■□□□□ 0.88
LTBR-206ENST00000536876 CHST3Q7LGC8 479 aa20.54■□□□□ 0.88
LTBR-206ENST00000536876 EMID1Q96A84 441 aaPredicted RBP20.54■□□□□ 0.88
LTBR-206ENST00000536876 DDX41Q9UJV9 622 aaKnown RBP20.54■□□□□ 0.88
LTBR-206ENST00000536876 HOXD8P13378 290 aaPredicted RBP20.53■□□□□ 0.88
LTBR-206ENST00000536876 PSEN2P49810 448 aa20.53■□□□□ 0.88
LTBR-206ENST00000536876 ZNF200P98182 395 aaPredicted RBP20.53■□□□□ 0.88
LTBR-206ENST00000536876 QRICH1Q2TAL8 776 aa20.53■□□□□ 0.88
LTBR-206ENST00000536876 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
LTBR-206ENST00000536876 MFSD6Q6ZSS7 791 aa20.53■□□□□ 0.88
LTBR-206ENST00000536876 ADGRF4Q8IZF3 695 aa20.53■□□□□ 0.88
LTBR-206ENST00000536876 NSUN6Q8TEA1 469 aaKnown RBP20.53■□□□□ 0.88
LTBR-206ENST00000536876 LMCD1Q9NZU5 365 aa20.53■□□□□ 0.88
LTBR-206ENST00000536876 PIEZO1Q92508 2521 aa20.53■□□□□ 0.88
LTBR-206ENST00000536876 PCP11498 1178 aaKnown RBP20.52■□□□□ 0.88
LTBR-206ENST00000536876 MFSD10Q14728 455 aa20.52■□□□□ 0.88
LTBR-206ENST00000536876 TMEM31Q5JXX7 168 aa20.52■□□□□ 0.88
LTBR-206ENST00000536876 ZNF618Q5T7W0 954 aa20.52■□□□□ 0.88
LTBR-206ENST00000536876 PNMA1Q8ND90 353 aa20.52■□□□□ 0.88
LTBR-206ENST00000536876 RMDN3Q96TC7 470 aa20.52■□□□□ 0.88
LTBR-206ENST00000536876 ALG1Q9BT22 464 aa20.52■□□□□ 0.88
LTBR-206ENST00000536876 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.51■□□□□ 0.87
LTBR-206ENST00000536876 B4DLN1 442 aa20.51■□□□□ 0.87
LTBR-206ENST00000536876 RGS20O76081 388 aa20.51■□□□□ 0.87
LTBR-206ENST00000536876 EIF2AK2P19525 551 aaKnown RBP20.51■□□□□ 0.87
LTBR-206ENST00000536876 CASTP20810 708 aaKnown RBP20.51■□□□□ 0.87
LTBR-206ENST00000536876 MRPL12P52815 198 aaKnown RBP20.51■□□□□ 0.87
LTBR-206ENST00000536876 DGKDQ16760 1214 aa20.51■□□□□ 0.87
LTBR-206ENST00000536876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.51■□□□□ 0.87
LTBR-206ENST00000536876 DGKHQ86XP1 1220 aa20.51■□□□□ 0.87
LTBR-206ENST00000536876 ANKS1AQ92625 1134 aa20.51■□□□□ 0.87
LTBR-206ENST00000536876 TGS1Q96RS0 853 aaKnown RBP20.51■□□□□ 0.87
LTBR-206ENST00000536876 IWS1Q96ST2 819 aa20.51■□□□□ 0.87
LTBR-206ENST00000536876 RAD9AQ99638 391 aa20.51■□□□□ 0.87
LTBR-206ENST00000536876 MAF1Q9H063 256 aa20.51■□□□□ 0.87
LTBR-206ENST00000536876 UBE2ZQ9H832 354 aaPredicted RBP20.51■□□□□ 0.87
LTBR-206ENST00000536876 ARIH1Q9Y4X5 557 aaPredicted RBP20.51■□□□□ 0.87
LTBR-206ENST00000536876 C5orf42Q9H799 3197 aa20.51■□□□□ 0.87
LTBR-206ENST00000536876 ABHD14A-ACY1A0A1B0GW23 586 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 GPR37L1O60883 481 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 GHRHRQ02643 423 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 PTK7Q13308 1070 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 STXBP2Q15833 593 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 KIAA0753Q2KHM9 967 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 FAM117BQ6P1L5 589 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 PPTC7Q8NI37 304 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 C17orf80Q9BSJ5 609 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 ZBED2Q9BTP6 218 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 JMJD4Q9H9V9 463 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 PXMP2Q9NR77 195 aa20.5■□□□□ 0.87
LTBR-206ENST00000536876 PPP1R11O60927 126 aaPredicted RBP20.49■□□□□ 0.87
LTBR-206ENST00000536876 KDM4AO75164 1064 aa20.49■□□□□ 0.87
LTBR-206ENST00000536876 PARNO95453 639 aaKnown RBP20.49■□□□□ 0.87
LTBR-206ENST00000536876 HSD17B4P51659 736 aa20.49■□□□□ 0.87
LTBR-206ENST00000536876 TICAM2Q86XR7 235 aa20.49■□□□□ 0.87
LTBR-206ENST00000536876 C7orf31Q8N865 590 aa20.49■□□□□ 0.87
LTBR-206ENST00000536876 ENAHQ8N8S7 591 aaPredicted RBP20.49■□□□□ 0.87
LTBR-206ENST00000536876 IL31RAQ8NI17 732 aa20.49■□□□□ 0.87
LTBR-206ENST00000536876 ESR2Q92731 530 aa20.49■□□□□ 0.87
LTBR-206ENST00000536876 OSBPL7Q9BZF2 842 aa20.49■□□□□ 0.87
LTBR-206ENST00000536876 HCN4Q9Y3Q4 1203 aa20.49■□□□□ 0.87
LTBR-206ENST00000536876 BAZ2BQ9UIF8 2168 aaKnown RBP20.49■□□□□ 0.87
LTBR-206ENST00000536876 MYO7AQ13402 2215 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms