RNA–Protein interactions for RNA: ENST00000528533.5

MCAM-208, Transcript of melanoma cell adhesion molecule, human

TSL 5

Gene MCAM, Length 3,164 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCAM-208	ENST00000528533	ZNF263	O14978	683 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	IDE	P14735	1019 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	CYLC1	P35663	651 aa	Predicted RBP	13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	SLC16A2	P36021	539 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	SNX29	Q8TEQ0	813 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	CDK5RAP3	Q96JB5	506 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	MMS19	Q96T76	1030 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	STK17A	Q9UEE5	414 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	FOCAD	Q5VW36	1801 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	EIF3CL	B5ME19	914 aa	Known RBP	13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	IRF6	O14896	467 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	HOXA10	P31260	410 aa	Predicted RBP	13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	PPP1R2	P41236	205 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	LRRC41	Q15345	812 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	UIMC1	Q96RL1	719 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	EIF3C	Q99613	913 aa	Known RBP	13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	PDE11A	Q9HCR9	933 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	SAR1B	Q9Y6B6	198 aa		13.76	□□□□□ -0.21
MCAM-208	ENST00000528533	hCG_1984214	I3L0E3	225 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	KRT86	O43790	486 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	ZNF543	Q08ER8	600 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	TMEM266	Q2M3C6	531 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	FKBP15	Q5T1M5	1219 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	ZNF713	Q8N859	430 aa	Predicted RBP	13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	RAD54L	Q92698	747 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	DDX12P	Q92771	950 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	CAPZA3	Q96KX2	299 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	MACROD2	A1Z1Q3	448 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	SCNN1D	P51172	638 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	TUBB4B	P68371	445 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	VWA3B	Q502W6	1294 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	PAPD7	Q5XG87	772 aa	Known RBP	13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	ZNF662	Q6ZS27	426 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	CCDC170	Q8IYT3	715 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	CEP120	Q8N960	986 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	NDST4	Q9H3R1	872 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	SIK3	Q9Y2K2	1263 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	UBR3	Q6ZT12	1888 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	GOLGB1	Q14789	3259 aa	Known RBP	13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	PVALEF	A0A1B0GWK0	134 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533		A0A1W2PQJ5	194 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	UBAP1L	F5GYI3	381 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	TTLL1	O95922	423 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	SATB1	Q01826	763 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	FIGN	Q5HY92	759 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	HDX	Q7Z353	690 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	HAS1	Q92839	578 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	RIC8A	Q9NPQ8	531 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	SERPINB13	Q9UIV8	391 aa		13.75	□□□□□ -0.21
MCAM-208	ENST00000528533	PNMA6F	A0A0J9YX94	578 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	N4BP1	O75113	896 aa	Known RBP	13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	ERLIN1	O75477	346 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	SHMT1	P34896	483 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	ATP2B2	Q01814	1243 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	PDIA5	Q14554	519 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	KRT79	Q5XKE5	535 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	KCTD1	Q719H9	257 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	GUF1	Q8N442	669 aa	Known RBP	13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	NEK11	Q8NG66	645 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	GJD4	Q96KN9	370 aa	Predicted RBP	13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	ARHGAP20	Q9P2F6	1191 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	ZNF185	O15231	689 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	GUCY2C	P25092	1073 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	C2CD5	Q86YS7	1000 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	CRAMP1	Q96RY5	1269 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	USP40	Q9NVE5	1235 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	PLAGL2	Q9UPG8	496 aa		13.74	□□□□□ -0.21
MCAM-208	ENST00000528533	USP17L10	C9JJH3	530 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	POLRMT	O00411	1230 aa	Known RBP	13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	IPO7	O95373	1038 aa	Known RBP	13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	CLK2	P49760	499 aa	Known RBP	13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	EHHADH	Q08426	723 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	TMEM119	Q4V9L6	283 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	LRRC55	Q6ZSA7	311 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	CCDC155	Q8N6L0	562 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	CCDC42	Q96M95	316 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	PURB	Q96QR8	312 aa	Known RBP	13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	MMRN2	Q9H8L6	949 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	DDX25	Q9UHL0	483 aa	Known RBP	13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	LTBP1	Q14766	1721 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	PPEF1	O14829	653 aa	Predicted RBP	13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	CDK17	Q00537	523 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	RAB34	Q9BZG1	259 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	MYH7B	A7E2Y1	1941 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	PDE2A	O00408	941 aa	Predicted RBP	13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	VAV2	P52735	878 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	CASP8	Q14790	479 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	MAN2A1	Q16706	1144 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	DOK7	Q18PE1	504 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	CCDC96	Q2M329	555 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	PPP4R3A	Q6IN85	833 aa		13.73	□□□□□ -0.21
MCAM-208	ENST00000528533	MPHOSPH10	O00566	681 aa	Known RBP	13.72	□□□□□ -0.21
MCAM-208	ENST00000528533	HNRNPH3	P31942	346 aa	Known RBP	13.72	□□□□□ -0.21
MCAM-208	ENST00000528533	USP14	P54578	494 aa		13.72	□□□□□ -0.21
MCAM-208	ENST00000528533	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.72	□□□□□ -0.21
MCAM-208	ENST00000528533	WDR93	Q6P2C0	686 aa		13.72	□□□□□ -0.21
MCAM-208	ENST00000528533	EHBP1	Q8NDI1	1231 aa		13.72	□□□□□ -0.21
MCAM-208	ENST00000528533	DNAJC19	Q96DA6	116 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms