RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 HUNKP57058 714 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CORO7P57737 925 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 NLRP12P59046 1061 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 TPM4P67936 248 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 FOXO4P98177 505 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 STK3Q13188 491 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 TUBA3CQ13748 450 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 BRD3Q15059 726 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 Q4G0T1 1027 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 SPECC1Q5M775 1068 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 DACT2Q5SW24 774 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 C10orf76Q5T2E6 689 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 ARMC4Q5T2S8 1044 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 COL13A1Q5TAT6 717 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-216ENST00000523088 SPATA1Q5VX52 437 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 ISM2Q6H9L7 571 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 ZNF449Q6P9G9 518 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 SLC4A10Q6U841 1118 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 LDHAL6AQ6ZMR3 332 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CLEC17AQ6ZS10 378 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 RUFY3Q7L099 469 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 SNX32Q86XE0 403 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 APOBEC3FQ8IUX4 373 aaKnown RBP8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CCDC170Q8IYT3 715 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 LILRB2Q8N423 598 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CARNMT1Q8N4J0 409 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 NKAIN3Q8N8D7 197 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 B4GALNT2Q8NHY0 566 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CTCFLQ8NI51 663 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-216ENST00000523088 ZFAND2BQ8WV99 257 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 ASIC4Q96FT7 647 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 MOGAT1Q96PD6 335 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 OSBPL9Q96SU4 736 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CORO1BQ9BR76 489 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 PHACTR1Q9C0D0 580 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CCDC113Q9H0I3 377 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CNNM1Q9NRU3 951 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 STK39Q9UEW8 545 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 MCM8Q9UJA3 840 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 TRPC6Q9Y210 931 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CARD8Q9Y2G2 431 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 GMEB1Q9Y692 573 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC3-216ENST00000523088 MROH5Q6ZUA9 1318 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 A0A087WUV0 522 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-216ENST00000523088 TARSL2A2RTX5 802 aaKnown RBP8.37□□□□□ -1.07
HDAC3-216ENST00000523088 F6X3S4 739 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 MUSKO15146 869 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 SART1O43290 800 aaKnown RBP8.37□□□□□ -1.07
HDAC3-216ENST00000523088 ZNF189O75820 626 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-216ENST00000523088 FESP07332 822 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 WEE1P30291 646 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 CA8P35219 290 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 COPAP53621 1224 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 PPIDQ08752 370 aaKnown RBP8.37□□□□□ -1.07
HDAC3-216ENST00000523088 SCARF1Q14162 830 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 LRRC23Q53EV4 343 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-216ENST00000523088 CYP4F22Q6NT55 531 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 RGMBQ6NW40 437 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 LMBR1LQ6UX01 489 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 ARHGAP22Q7Z5H3 698 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 USP48Q86UV5 1035 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 APLFQ8IW19 511 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-216ENST00000523088 PRPF38AQ8NAV1 312 aaKnown RBP8.37□□□□□ -1.07
HDAC3-216ENST00000523088 SPIRE2Q8WWL2 714 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 C1orf74Q96LT6 269 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 IER2Q9BTL4 223 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 PDRG1Q9NUG6 133 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 KCTD5Q9NXV2 234 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 SAGE1Q9NXZ1 904 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.37□□□□□ -1.07
HDAC3-216ENST00000523088 AIPL1Q9NZN9 384 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 PRELID1Q9Y255 219 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 SPO11Q9Y5K1 396 aa8.37□□□□□ -1.07
HDAC3-216ENST00000523088 LAMB1P07942 1786 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 KIF2AO00139 706 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 EVI5O60447 810 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 MGEA5O60502 916 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 HSPA8P11142 646 aaKnown RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 IL1R1P14778 569 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 FERP16591 822 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 GCLCP48506 637 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 ITIH3Q06033 890 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 SLFN5Q08AF3 891 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 ACAP1Q15027 740 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 INAQ16352 499 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 TRIM71Q2Q1W2 868 aaKnown RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 WDR45BQ5MNZ6 344 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 ODR4Q5SWX8 454 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 ANGEL2Q5VTE6 544 aaKnown RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 KAZNQ674X7 775 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 LMBRD2Q68DH5 695 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 MTHFD1LQ6UB35 978 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 MRPL50Q8N5N7 158 aaKnown RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 ESX1Q8N693 406 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 KRI1Q8N9T8 703 aaKnown RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 MTMR14Q8NCE2 650 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 GIMAP8Q8ND71 665 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 SPATA18Q8TC71 538 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 PPP2R3CQ969Q6 453 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms