RNA–Protein interactions for RNA: ENST00000520462.5

TSNARE1-206, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-206ENST00000520462 TAPT1Q6NXT6 567 aa17.76■□□□□ 0.43
TSNARE1-206ENST00000520462 SCFD2Q8WU76 684 aa17.76■□□□□ 0.43
TSNARE1-206ENST00000520462 LARP6Q9BRS8 491 aaKnown RBP17.76■□□□□ 0.43
TSNARE1-206ENST00000520462 WDR11Q9BZH6 1224 aa17.76■□□□□ 0.43
TSNARE1-206ENST00000520462 UPF2Q9HAU5 1272 aaKnown RBP17.76■□□□□ 0.43
TSNARE1-206ENST00000520462 STARD7Q9NQZ5 370 aa17.76■□□□□ 0.43
TSNARE1-206ENST00000520462 TMEM39AQ9NV64 488 aa17.76■□□□□ 0.43
TSNARE1-206ENST00000520462 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.75■□□□□ 0.43
TSNARE1-206ENST00000520462 ITGB8P26012 769 aa17.75■□□□□ 0.43
TSNARE1-206ENST00000520462 ACLYP53396 1101 aa17.75■□□□□ 0.43
TSNARE1-206ENST00000520462 STK3Q13188 491 aa17.75■□□□□ 0.43
TSNARE1-206ENST00000520462 WWC2Q6AWC2 1192 aa17.75■□□□□ 0.43
TSNARE1-206ENST00000520462 PPP1R18Q6NYC8 613 aa17.75■□□□□ 0.43
TSNARE1-206ENST00000520462 TLK2Q86UE8 772 aa17.75■□□□□ 0.43
TSNARE1-206ENST00000520462 PCSK9Q8NBP7 692 aaKnown RBP17.75■□□□□ 0.43
TSNARE1-206ENST00000520462 DCDC2CA8MYV0 355 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 PIK3CDO00329 1044 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 ADCY6O43306 1168 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 EIF3JO75822 258 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 SMPD1P17405 629 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 CCND2P30279 289 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 NEK4P51957 841 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 GJA9P57773 515 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 TTLL4Q14679 1199 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 KCNA10Q16322 511 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 DUSP28Q4G0W2 176 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 GNASQ5JWF2 1037 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 USP17L6PQ6QN14 398 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 SEPT14Q6ZU15 432 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 TRIM22Q8IYM9 498 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 VTI1AQ96AJ9 217 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 IL17RAQ96F46 866 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 RNPC3Q96LT9 517 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 PDCD2LQ9BRP1 358 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 TSEN34Q9BSV6 310 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 SLC26A6Q9BXS9 759 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 UPF3AQ9H1J1 476 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 ALDH8A1Q9H2A2 487 aaPredicted RBP17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 NCOA5Q9HCD5 579 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 Q9Y3F1 56 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 MYH7BA7E2Y1 1941 aa17.74■□□□□ 0.43
TSNARE1-206ENST00000520462 UNC80Q8N2C7 3258 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 RBM47A0AV96 593 aaKnown RBP17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 MOXD2PA6NHM9 499 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 SPDYE3A6NKU9 549 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 KIAA0355O15063 1070 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.433e-6■■■■□ 19.4
TSNARE1-206ENST00000520462 PRPF3O43395 683 aaKnown RBP17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 ZEB2O60315 1214 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 SCG2P13521 617 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 IFNAR1P17181 557 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 AK2P54819 239 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 PGM5Q15124 567 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 PFKFB3Q16875 520 aaPredicted RBP17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 CCDC12Q8WUD4 166 aaPredicted RBP17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 PHKBQ93100 1093 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 CDX2Q99626 313 aaPredicted RBP17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 RNF26Q9BY78 433 aaPredicted RBP17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 GLT8D2Q9H1C3 349 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 SLKQ9H2G2 1235 aaPredicted RBP17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 EHMT1Q9H9B1 1298 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 BARHL2Q9NY43 387 aa17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 GNEQ9Y223 722 aaKnown RBP17.73■□□□□ 0.43
TSNARE1-206ENST00000520462 MYADML2A6NDP7 307 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 MEIS2O14770 477 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 CST5P28325 142 aaPredicted RBP17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 ADCY7P51828 1080 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 EPHB4P54760 987 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 IRX5P78411 483 aaPredicted RBP17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 SMAD3P84022 425 aaKnown RBP17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 FPGSQ05932 587 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 SSRP1Q08945 709 aaKnown RBP17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 FAAP100Q0VG06 881 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 BRDTQ58F21 947 aaPredicted RBP17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 KLHDC9Q8NEP7 349 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 OR6J1Q8NGC5 347 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 GLT1D1Q96MS3 346 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 C22orf23Q9BZE7 217 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 SEMA6BQ9H3T3 888 aa17.72■□□□□ 0.43
TSNARE1-206ENST00000520462 SMCO2A6NFE2 343 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 STXBP3O00186 592 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 CDKL5O76039 1030 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 BEX3Q00994 111 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 NTRK3Q16288 839 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 FSCN1Q16658 493 aaKnown RBP17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 UBE2SQ16763 222 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 ANKRD33Q7Z3H0 272 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 VSIG10LQ86VR7 867 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 TEX2Q8IWB9 1127 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 MRVI1Q9Y6F6 885 aa17.71■□□□□ 0.43
TSNARE1-206ENST00000520462 PPFIA3O75145 1194 aa17.7■□□□□ 0.42
TSNARE1-206ENST00000520462 ASGR1P07306 291 aa17.7■□□□□ 0.42
TSNARE1-206ENST00000520462 KCNV1Q6PIU1 500 aa17.7■□□□□ 0.42
TSNARE1-206ENST00000520462 CCDC148Q8NFR7 591 aa17.7■□□□□ 0.42
TSNARE1-206ENST00000520462 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
TSNARE1-206ENST00000520462 TOX2Q96NM4 488 aa17.7■□□□□ 0.42
TSNARE1-206ENST00000520462 RIC8AQ9NPQ8 531 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms