RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
CPEB4-203ENST00000517880 SNX29Q8TEQ0 813 aa12.04□□□□□ -0.48
CPEB4-203ENST00000517880 NELFBQ8WX92 580 aa12.04□□□□□ -0.48
CPEB4-203ENST00000517880 LARP4BQ92615 738 aaKnown RBP12.04□□□□□ -0.48
CPEB4-203ENST00000517880 RAD54LQ92698 747 aa12.04□□□□□ -0.48
CPEB4-203ENST00000517880 NAP1L5Q96NT1 182 aaPredicted RBP12.04□□□□□ -0.48
CPEB4-203ENST00000517880 PNMA5Q96PV4 448 aa12.04□□□□□ -0.48
CPEB4-203ENST00000517880 SAMSN1Q9NSI8 373 aaKnown RBP12.04□□□□□ -0.48
CPEB4-203ENST00000517880 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
CPEB4-203ENST00000517880 EXOC1Q9NV70 894 aa12.04□□□□□ -0.48
CPEB4-203ENST00000517880 MAP3K20Q9NYL2 800 aaKnown RBP12.04□□□□□ -0.48
CPEB4-203ENST00000517880 LIMA1Q9UHB6 759 aaKnown RBP12.04□□□□□ -0.48
CPEB4-203ENST00000517880 CTNND2Q9UQB3 1225 aa12.04□□□□□ -0.48
CPEB4-203ENST00000517880 PPP2R3BQ9Y5P8 575 aa12.04□□□□□ -0.48
CPEB4-203ENST00000517880 GJA3Q9Y6H8 435 aa12.04□□□□□ -0.48
CPEB4-203ENST00000517880 CCP110O43303 1012 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 ASIC1P78348 528 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 LRMPQ12912 555 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 KIF4BQ2VIQ3 1234 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 KIAA1755Q5JYT7 1200 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 DNTTIP2Q5QJE6 756 aaKnown RBP12.03□□□□□ -0.48
CPEB4-203ENST00000517880 SPECC1LQ69YQ0 1117 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 FOXR2Q6PJQ5 311 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 UNC13DQ70J99 1090 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 TRMT44Q8IYL2 757 aaKnown RBP12.03□□□□□ -0.48
CPEB4-203ENST00000517880 PLIN2Q99541 437 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 FEZ1Q99689 392 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 ZNF341Q9BYN7 854 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 THAP9Q9H5L6 903 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 BLOC1S4Q9NUP1 217 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 HACL1Q9UJ83 578 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 TUBB4AP04350 444 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 ICAM1P05362 532 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 ZNF76P36508 570 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 CCT6AP40227 531 aaKnown RBP12.03□□□□□ -0.48
CPEB4-203ENST00000517880 STX17P56962 302 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 CCZ1BP86790 482 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
CPEB4-203ENST00000517880 PDE4DQ08499 809 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 TBX2Q13207 712 aaPredicted RBP12.03□□□□□ -0.48
CPEB4-203ENST00000517880 HAUS3Q68CZ6 603 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 MCF2L2Q86YR7 1114 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 FAM114A1Q8IWE2 563 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 ETNPPLQ8TBG4 499 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 KIFC2Q96AC6 838 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 WDR18Q9BV38 432 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 AS3MTQ9HBK9 375 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 ADD3Q9UEY8 706 aaKnown RBP12.03□□□□□ -0.48
CPEB4-203ENST00000517880 ZNF112Q9UJU3 913 aa12.03□□□□□ -0.48
CPEB4-203ENST00000517880 ATAD5Q96QE3 1844 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 OPLAHO14841 1288 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 FGFR1OPO95684 399 aaKnown RBP12.02□□□□□ -0.49
CPEB4-203ENST00000517880 LMNB1P20700 586 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 MUTP22033 750 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 CCNE1P24864 410 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 EEF1GP26641 437 aaKnown RBP12.02□□□□□ -0.49
CPEB4-203ENST00000517880 SNAP25P60880 206 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 RASSF7Q02833 373 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 ARMCX5Q6P1M9 558 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 SAMD7Q7Z3H4 446 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 LDHDQ86WU2 507 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 SMYD4Q8IYR2 804 aaPredicted RBP12.02□□□□□ -0.49
CPEB4-203ENST00000517880 GPC2Q8N158 579 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.49
CPEB4-203ENST00000517880 PRIMPOLQ96LW4 560 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 SLF1Q9BQI6 1058 aa12.02□□□□□ -0.49
CPEB4-203ENST00000517880 ITIH6Q6UXX5 1313 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 SHTN1A0MZ66 631 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
CPEB4-203ENST00000517880 KIF2AO00139 706 aaPredicted RBP12.01□□□□□ -0.49
CPEB4-203ENST00000517880 TPM2P07951 284 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 GHRHRQ02643 423 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 MCM6Q14566 821 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 TBC1D10BQ4KMP7 808 aaPredicted RBP12.01□□□□□ -0.49
CPEB4-203ENST00000517880 PRR16Q569H4 304 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 TCP11X2Q5H9J9 407 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 CCDC174Q6PII3 467 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 APTXQ7Z2E3 356 aaKnown RBP12.01□□□□□ -0.49
CPEB4-203ENST00000517880 FCHSD1Q86WN1 690 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 LRRC15Q8TF66 581 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 P2RX5Q93086 422 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 MAF1Q9H063 256 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 TMX1Q9H3N1 280 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 SPON1Q9HCB6 807 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 MAGEC2Q9UBF1 373 aaPredicted RBP12.01□□□□□ -0.49
CPEB4-203ENST00000517880 GDAQ9Y2T3 454 aa12.01□□□□□ -0.49
CPEB4-203ENST00000517880 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.01□□□□□ -0.49
CPEB4-203ENST00000517880 MYMKA6NI61 221 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 KCNJ18B7U540 433 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 C19orf81C9J6K1 198 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 ZBED4O75132 1171 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 KIF20AO95235 890 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 CFBP00751 764 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 TPM1P09493 284 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 RPA1P27694 616 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 HSD17B4P51659 736 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 PRELPP51888 382 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 TRIM14Q14142 442 aa12□□□□□ -0.49
CPEB4-203ENST00000517880 KCNJ12Q14500 433 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms