RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 SIPA1L3O60292 1781 aaPredicted RBP8.97□□□□□ -0.97
RFC1-213ENST00000512275 hCG_2014768A0A024R1R8 64 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 CCDC163A0A0D9SF12 145 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 AGRPO00253 132 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 SLITRK5O94991 958 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 VIL1P09327 827 aaKnown RBP8.97□□□□□ -0.97
RFC1-213ENST00000512275 RNF4P78317 190 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 DCTN1Q14203 1278 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 TAF7LQ5H9L4 462 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 LETMD1Q6P1Q0 360 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 SEZ6L2Q6UXD5 910 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 ZNF227Q86WZ6 799 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 CCDC144CPQ8IYA2 1237 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 NGEFQ8N5V2 710 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 RAPGEF4Q8WZA2 1011 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 UBL7Q96S82 380 aaPredicted RBP8.97□□□□□ -0.97
RFC1-213ENST00000512275 ZNF451Q9Y4E5 1061 aa8.97□□□□□ -0.97
RFC1-213ENST00000512275 ITGAVP06756 1048 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 GLB1P16278 677 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 NOS3P29474 1203 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 PPP2R2AP63151 447 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 MEX3CQ5U5Q3 659 aaKnown RBP8.96□□□□□ -0.98
RFC1-213ENST00000512275 ZNF530Q6P9A1 599 aaPredicted RBP8.96□□□□□ -0.98
RFC1-213ENST00000512275 C7orf61Q8IZ16 206 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 RIN3Q8TB24 985 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 MIPEPQ99797 713 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 MKRN2Q9H000 416 aaKnown RBP8.96□□□□□ -0.98
RFC1-213ENST00000512275 DAGLAQ9Y4D2 1042 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 ADAMTS7Q9UKP4 1686 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 MAP3K5Q99683 1374 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 OVOS2A0A0G2JMS6 1433 aa8.96□□□□□ -0.98
RFC1-213ENST00000512275 TOGARAM1Q9Y4F4 1720 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 KDM3BQ7LBC6 1761 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 DYNC1LI2O43237 492 aaPredicted RBP8.95□□□□□ -0.98
RFC1-213ENST00000512275 SART1O43290 800 aaKnown RBP8.95□□□□□ -0.98
RFC1-213ENST00000512275 GAS2O43903 313 aaKnown RBP8.95□□□□□ -0.98
RFC1-213ENST00000512275 CD247P20963 164 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 IBSPP21815 317 aaPredicted RBP8.95□□□□□ -0.98
RFC1-213ENST00000512275 USP11P51784 963 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 IGBP1P78318 339 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 NRG1Q02297 640 aaPredicted RBP8.95□□□□□ -0.98
RFC1-213ENST00000512275 SLFN5Q08AF3 891 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 LMOD3Q0VAK6 560 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 AUHQ13825 339 aaKnown RBP8.95□□□□□ -0.98
RFC1-213ENST00000512275 UVSSAQ2YD98 709 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 PLEKHO1Q53GL0 409 aaPredicted RBP8.95□□□□□ -0.98
RFC1-213ENST00000512275 SGO2Q562F6 1265 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 YOD1Q5VVQ6 348 aaPredicted RBP8.95□□□□□ -0.98
RFC1-213ENST00000512275 MCM10Q7L590 875 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 TXNRD3Q86VQ6 643 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 RNF141Q8WVD5 230 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 WFDC12Q8WWY7 111 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 FGD4Q96M96 766 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 FBXL18Q96ME1 805 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 AARSD1Q9BTE6 412 aaKnown RBP8.95□□□□□ -0.98
RFC1-213ENST00000512275 ASPNQ9BXN1 380 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 WHRNQ9P202 907 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 USP21Q9UK80 565 aa8.95□□□□□ -0.98
RFC1-213ENST00000512275 TRAV20A0A0B4J274 112 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 RFPL3O75679 317 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 NFICP08651 508 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 AMPD3Q01432 767 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 HSP90AA2PQ14568 343 aaPredicted RBP8.94□□□□□ -0.98
RFC1-213ENST00000512275 PRSS36Q5K4E3 855 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 WDR63Q8IWG1 891 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 FBLIM1Q8WUP2 373 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 NINJ1Q92982 152 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 TSR2Q969E8 191 aaKnown RBP8.94□□□□□ -0.98
RFC1-213ENST00000512275 RCC1LQ96I51 464 aaKnown RBP8.94□□□□□ -0.98
RFC1-213ENST00000512275 MRGPRX3Q96LB0 322 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 DHRS4Q9BTZ2 278 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 LGR4Q9BXB1 951 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
RFC1-213ENST00000512275 GP6Q9HCN6 339 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 MRPS23Q9Y3D9 190 aaKnown RBP8.94□□□□□ -0.98
RFC1-213ENST00000512275 LAS1LQ9Y4W2 734 aaKnown RBP8.94□□□□□ -0.98
RFC1-213ENST00000512275 BCL9LQ86UU0 1499 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 DOT1LQ8TEK3 1739 aa8.94□□□□□ -0.98
RFC1-213ENST00000512275 SCO2A0A1W2PP80 73 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 GNAT3A8MTJ3 354 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 FGFR1P11362 822 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 IL2RBP14784 551 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 L1CAMP32004 1257 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 ETV3P41162 512 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 IREB2P48200 963 aaKnown RBP8.93□□□□□ -0.98
RFC1-213ENST00000512275 AMOTQ4VCS5 1084 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 TM4SF20Q53R12 229 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 C1orf141Q5JVX7 400 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 FAM209AQ5JX71 171 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 DUSP27Q5VZP5 1158 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 CDH24Q86UP0 819 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 DZIP1LQ8IYY4 767 aaKnown RBP8.93□□□□□ -0.98
RFC1-213ENST00000512275 LRRN4CLQ8ND94 238 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 BVESQ8NE79 360 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 RTF1Q92541 710 aaKnown RBP8.93□□□□□ -0.98
RFC1-213ENST00000512275 MYRFLQ96LU7 910 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 YIPF2Q9BWQ6 316 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 PRDM10Q9NQV6 1147 aa8.93□□□□□ -0.98
RFC1-213ENST00000512275 FANCIQ9NVI1 1328 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms