RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 PIK3R5Q8WYR1 880 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 ALS2CR12Q96Q35 445 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 MYL10Q9BUA6 226 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 THAP9Q9H5L6 903 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 PIH1D3Q9NQM4 214 aaKnown RBP13.19□□□□□ -0.3
TP53-208ENST00000504290 XDHP47989 1333 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 DNM1LO00429 736 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 COBLO75128 1261 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 DNAJC8O75937 253 aaPredicted RBP13.19□□□□□ -0.3
TP53-208ENST00000504290 SRGNP10124 158 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 GHRP10912 638 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 MATR3P43243 847 aaKnown RBP eCLIP13.19□□□□□ -0.3
TP53-208ENST00000504290 SH2D4AQ9H788 454 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 HAUS2Q9NVX0 235 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
TP53-208ENST00000504290 KLHL33A6NCF5 533 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 C5orf60A6NFR6 353 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 GOLGA6L10A6NI86 522 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 IFIT3O14879 490 aaKnown RBP13.18□□□□□ -0.3
TP53-208ENST00000504290 PDE6AP16499 860 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
TP53-208ENST00000504290 SCTRP47872 440 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 TBC1D8BQ0IIM8 1120 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 NAA25Q14CX7 972 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 CCDC96Q2M329 555 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 LRIG3Q6UXM1 1119 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
TP53-208ENST00000504290 SPATA5Q8NB90 893 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 NKX2-3Q8TAU0 364 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 CCDC42Q96M95 316 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 A0A1W2PQJ5 194 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
TP53-208ENST00000504290 TRAPPC3O43617 180 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 IDH1O75874 414 aaKnown RBP13.18□□□□□ -0.3
TP53-208ENST00000504290 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
TP53-208ENST00000504290 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 SLMAPQ14BN4 828 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 SF3B3Q15393 1217 aaKnown RBP13.18□□□□□ -0.3
TP53-208ENST00000504290 RTN1Q16799 776 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 FIGNQ5HY92 759 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 CRELD2Q6UXH1 353 aaPredicted RBP13.18□□□□□ -0.3
TP53-208ENST00000504290 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
TP53-208ENST00000504290 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 TMBIM4Q9HC24 238 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
TP53-208ENST00000504290 AGPAT5Q9NUQ2 364 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 LRWD1Q9UFC0 647 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 NFU1Q9UMS0 254 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 CAPN6Q9Y6Q1 641 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 ZNF532Q9HCE3 1301 aa13.18□□□□□ -0.3
TP53-208ENST00000504290 LY75O60449 1722 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 TCRBV5S4A2TA0A5A2 114 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 C2orf72A6NCS6 295 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 XBP1P17861 261 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 CARSP49589 748 aaKnown RBP13.17□□□□□ -0.3
TP53-208ENST00000504290 RCAN1P53805 252 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 CYP27A1Q02318 531 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 E2F5Q15329 346 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 ALX1Q15699 326 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 CFAP221Q4G0U5 840 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 CACNA2D3Q8IZS8 1091 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 NOC3LQ8WTT2 800 aaKnown RBP13.17□□□□□ -0.3
TP53-208ENST00000504290 MS4A3Q96HJ5 214 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 PHOX2BQ99453 314 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 BLZF1Q9H2G9 400 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 EXOC1Q9NV70 894 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 MAGEC2Q9UBF1 373 aaPredicted RBP13.17□□□□□ -0.3
TP53-208ENST00000504290 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
TP53-208ENST00000504290 SSBP05455 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
TP53-208ENST00000504290 PRCPP42785 496 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 PDXDC2PQ6P474 469 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 NFRKBQ6P4R8 1299 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 EIF1ADQ8N9N8 165 aaKnown RBP13.17□□□□□ -0.3
TP53-208ENST00000504290 ZNF483Q8TF39 744 aaPredicted RBP13.17□□□□□ -0.3
TP53-208ENST00000504290 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
TP53-208ENST00000504290 NYXQ9GZU5 481 aa13.17□□□□□ -0.3
TP53-208ENST00000504290 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
TP53-208ENST00000504290 SPATS2LQ9NUQ6 558 aaKnown RBP13.17□□□□□ -0.3
TP53-208ENST00000504290 CHD4Q14839 1912 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
TP53-208ENST00000504290 GLI1P08151 1106 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 FAM153BP0C7A2 387 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 HSPA9P38646 679 aaKnown RBP13.16□□□□□ -0.3
TP53-208ENST00000504290 CDC37Q16543 378 aaPredicted RBP13.16□□□□□ -0.3
TP53-208ENST00000504290 FAM153CQ494X1 144 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 SLC10A5Q5PT55 438 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 ADSSL1Q8N142 457 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 STAMQ92783 540 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 SH3GL3Q99963 347 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 EBF2Q9HAK2 575 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 EPB41L5Q9HCM4 733 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 PLCB1Q9NQ66 1216 aa13.16□□□□□ -0.3
TP53-208ENST00000504290 ZSWIM5Q9P217 1185 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms