RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	GCFC2	P16383	781 aa	Known RBP	13.82	□□□□□ -0.2
MATR3-231	ENST00000502394	TM4SF4	P48230	202 aa		13.82	□□□□□ -0.2
MATR3-231	ENST00000502394	PLS1	Q14651	629 aa		13.82	□□□□□ -0.2
MATR3-231	ENST00000502394	LETM2	Q2VYF4	491 aa		13.82	□□□□□ -0.2
MATR3-231	ENST00000502394	ZIC5	Q96T25	663 aa		13.82	□□□□□ -0.2
MATR3-231	ENST00000502394	TMEM60	Q9H2L4	133 aa		13.82	□□□□□ -0.2
MATR3-231	ENST00000502394	CYP39A1	Q9NYL5	469 aa		13.82	□□□□□ -0.2
MATR3-231	ENST00000502394	MRVI1	Q9Y6F6	885 aa		13.82	□□□□□ -0.2
MATR3-231	ENST00000502394	LCT	P09848	1927 aa		13.82	□□□□□ -0.2
MATR3-231	ENST00000502394		A0A1W2PQ27	194 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394		A0A1W2PQ64	194 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394		A0A1W2PQD8	194 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	ERCC3	P19447	782 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	MARCKS	P29966	332 aa	Predicted RBP	13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	MCM7	P33993	719 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	PTGDR	Q13258	359 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	BAAT	Q14032	418 aa	Predicted RBP	13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	ADAL	Q6DHV7	355 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	CYP4F22	Q6NT55	531 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	NSMF	Q6X4W1	530 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	RNF207	Q6ZRF8	634 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	FCHSD1	Q86WN1	690 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	JMY	Q8N9B5	988 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	GPT2	Q8TD30	523 aa		13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	NAP1L4	Q99733	375 aa	Known RBP	13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	SRPRB	Q9Y5M8	271 aa	Known RBP	13.81	□□□□□ -0.2
MATR3-231	ENST00000502394	FAM237A	A0A1B0GTK4	181 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	LAD1	O00515	517 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	SLC37A4	O43826	429 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	CCNT1	O60563	726 aa	Known RBP	13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	CUTA	O60888	179 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	BCR	P11274	1271 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	PRPH	P41219	470 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	GRIN1	Q05586	938 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	SREBF2	Q12772	1141 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	FAM110C	Q1W6H9	321 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	KRI1	Q8N9T8	703 aa	Known RBP	13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	LENG9	Q96B70	501 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	MTMR9	Q96QG7	549 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	TAAR1	Q96RJ0	339 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	PORCN	Q9H237	461 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	EHMT1	Q9H9B1	1298 aa		13.8	□□□□□ -0.2
MATR3-231	ENST00000502394	IGLV3-22	A0A075B6J6	115 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	NEMF	O60524	1076 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	ME1	P48163	572 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	NOG	Q13253	232 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	IL17A	Q16552	155 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	KLHL40	Q2TBA0	621 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	DEFB115	Q30KQ5	88 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394		Q4G0T1	1027 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	SHC4	Q6S5L8	630 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	NCAPG2	Q86XI2	1143 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	ANKRD13C	Q8N6S4	541 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	GPRC5A	Q8NFJ5	357 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	IL31RA	Q8NI17	732 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	FERMT2	Q96AC1	680 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	PURB	Q96QR8	312 aa	Known RBP	13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	PDCD2L	Q9BRP1	358 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	MROH8	Q9H579	483 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	KCNMB3	Q9NPA1	279 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	PXMP2	Q9NR77	195 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	ASTN1	O14525	1302 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	PFAS	O15067	1338 aa		13.79	□□□□□ -0.2
MATR3-231	ENST00000502394	DNAJC25-GNG10	A0A024R161	153 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	FAM86B1	E9PN63	330 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	TRAK2	O60296	914 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	MBD3	O95983	291 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	FAM86B2	P0C5J1	330 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	OR52Z1	P0C646	297 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	CMA1	P23946	247 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	TAF1C	Q15572	869 aa	Predicted RBP	13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	RESP18	Q5W5W9	173 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	PCNX4	Q63HM2	1172 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	C17orf99	Q6UX52	265 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	FAM133A	Q8N9E0	248 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	ETNPPL	Q8TBG4	499 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	HAS1	Q92839	578 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	CAPNS2	Q96L46	248 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	FGD4	Q96M96	766 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	CLIC6	Q96NY7	704 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	GOLPH3L	Q9H4A5	285 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	EFCC1	Q9HA90	598 aa		13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	RYDEN	Q9NUL5	291 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	DDX25	Q9UHL0	483 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-231	ENST00000502394	C2orf72	A6NCS6	295 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	TBX3	O15119	743 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	TLR2	O60603	784 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	LIG1	P18858	919 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	EDNRB	P24530	442 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	CCNA1	P78396	465 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	MRPS9	P82933	396 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	PGM5	Q15124	567 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	XRRA1	Q6P2D8	792 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	NIPA1	Q7RTP0	329 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	ENGASE	Q8NFI3	743 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	DNER	Q8NFT8	737 aa		13.77	□□□□□ -0.21
MATR3-231	ENST00000502394	RMDN3	Q96TC7	470 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms