RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 LRRC31Q6UY01 552 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 UNC13DQ70J99 1090 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 C10orf67Q8IYJ2 551 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 DDX12PQ92771 950 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 RPGRIP1Q96KN7 1286 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 ACBD3Q9H3P7 528 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 VIPAS39Q9H9C1 493 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 CD209Q9NNX6 404 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 JRKLQ9Y4A0 524 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 MYO1CO00159 1063 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 HNRNPH3P31942 346 aaKnown RBP14.45□□□□□ -0.1
PTPN7-217ENST00000495688 RHBDL3P58872 404 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 APBA1Q02410 837 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 MAP9Q49MG5 647 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 TMC4Q7Z404 712 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 TRIM58Q8NG06 486 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 SNX29Q8TEQ0 813 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 ZNF287Q9HBT7 754 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 GPCPD1Q9NPB8 672 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 COL24A1Q17RW2 1714 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 GPR75-ASB3A0A0A6YYF3 556 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 ANKRD65E5RJM6 399 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 UFL1O94874 794 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 TNNI2P48788 182 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 PDE4CQ08493 712 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
PTPN7-217ENST00000495688 MAN2A1Q16706 1144 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 LRRC55Q6ZSA7 311 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 BAP1Q92560 729 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 FGFBP2Q9BYJ0 223 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 TANGO6Q9C0B7 1094 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 NLRC4Q9NPP4 1024 aa14.45□□□□□ -0.1
PTPN7-217ENST00000495688 CWC15Q9P013 229 aaKnown RBP14.45□□□□□ -0.1
PTPN7-217ENST00000495688 CCNL1Q9UK58 526 aaPredicted RBP14.45□□□□□ -0.1
PTPN7-217ENST00000495688 AHDC1Q5TGY3 1603 aaPredicted RBP14.45□□□□□ -0.1
PTPN7-217ENST00000495688 BUB1O43683 1085 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 USO1O60763 962 aaKnown RBP14.44□□□□□ -0.1
PTPN7-217ENST00000495688 TACC1O75410 805 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 PICALMQ13492 652 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 SRLQ86TD4 932 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 SPATA4Q8NEY3 305 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 RIOX1Q9H6W3 641 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 TBC1D7Q9P0N9 293 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 SLURP2P0DP57 97 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 MCM3P25205 808 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 RASSF7Q02833 373 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 COBLL1Q53SF7 1204 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 MFSD14BQ5SR56 506 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 RC3H1Q5TC82 1133 aaKnown RBP14.44□□□□□ -0.1
PTPN7-217ENST00000495688 GUF1Q8N442 669 aaKnown RBP14.44□□□□□ -0.1
PTPN7-217ENST00000495688 RAD54LQ92698 747 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 MTMR8Q96EF0 704 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 OSBPL9Q96SU4 736 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 CRACR2AQ9BSW2 395 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 TSGA10Q9BZW7 698 aa14.44□□□□□ -0.1
PTPN7-217ENST00000495688 RRP15Q9Y3B9 282 aaKnown RBP14.44□□□□□ -0.1
PTPN7-217ENST00000495688 PPP1R2P41236 205 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 SLC1A4P43007 532 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPN7-217ENST00000495688 DNA2P51530 1060 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 KCNMA1Q12791 1236 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 FNBP4Q8N3X1 1017 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-217ENST00000495688 AFAP1L1Q8TED9 768 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 PVALEFA0A1B0GWK0 134 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 PPP1R11O60927 126 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-217ENST00000495688 MAGEA1P43355 309 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 NT5C2P49902 561 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 ADCY7P51828 1080 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-217ENST00000495688 SND1Q7KZF4 910 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPN7-217ENST00000495688 MS4A14Q96JA4 679 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 TRIM34Q9BYJ4 488 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 STK17AQ9UEE5 414 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 RSPH14Q9UHP6 348 aa14.43□□□□□ -0.1
PTPN7-217ENST00000495688 SSBP05455 408 aaKnown RBP eCLIP14.42□□□□□ -0.1
PTPN7-217ENST00000495688 AKR1B1P15121 316 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 RFC4P35249 363 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 TMEM266Q2M3C6 531 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 TTBK2Q6IQ55 1244 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 CACNA2D4Q7Z3S7 1137 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 CCDC84Q86UT8 332 aaPredicted RBP14.42□□□□□ -0.1
PTPN7-217ENST00000495688 CNBD1Q8NA66 436 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 AENQ8WTP8 325 aaKnown RBP14.42□□□□□ -0.1
PTPN7-217ENST00000495688 ESYT2A0FGR8 921 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 LCA5LO95447 670 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 SLC16A2P36021 539 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 EHHADHQ08426 723 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 TDRD12Q587J7 1177 aaKnown RBP14.42□□□□□ -0.1
PTPN7-217ENST00000495688 KRT79Q5XKE5 535 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 HGSNATQ68CP4 663 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 MTMR4Q9NYA4 1195 aa14.42□□□□□ -0.1
PTPN7-217ENST00000495688 RGL2O15211 777 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 TLR2O60603 784 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 LRRC63Q05C16 580 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 ENOX2Q16206 610 aaKnown RBP14.41□□□□□ -0.1
PTPN7-217ENST00000495688 ASTE1Q2TB18 679 aaPredicted RBP14.41□□□□□ -0.1
PTPN7-217ENST00000495688 MMGT1Q8N4V1 131 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 GOLGA6L1Q8N7Z2 621 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 HAS1Q92839 578 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 DNAJC19Q96DA6 116 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms