RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SNAI1O95863 264 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-223ENST00000494123 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
BRCA1-223ENST00000494123 CACNB2Q08289 660 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-223ENST00000494123 ACVR2BQ13705 512 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 INF2Q27J81 1249 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 PRAMEF19Q5SWL8 479 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 FBXO16Q8IX29 292 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-223ENST00000494123 ZFP91Q96JP5 570 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-223ENST00000494123 MCOLN1Q9GZU1 580 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 KIF28PB7ZC32 967 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 IGHA2P01877 340 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 CNGA1P29973 690 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 GNPTABQ3T906 1256 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 NOSTRINQ8IVI9 506 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 TNFRSF25Q93038 417 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 RTEL1Q9NZ71 1219 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 NRBP1Q9UHY1 535 aa16.59■□□□□ 0.25
BRCA1-223ENST00000494123 U2AF2P26368 475 aaKnown RBP eCLIP16.58■□□□□ 0.241e-6■■■□□ 19.1
BRCA1-223ENST00000494123 MRPS9P82933 396 aaKnown RBP16.58■□□□□ 0.24
BRCA1-223ENST00000494123 SEPT14Q6ZU15 432 aa16.58■□□□□ 0.24
BRCA1-223ENST00000494123 NEK8Q86SG6 692 aa16.58■□□□□ 0.24
BRCA1-223ENST00000494123 NLRX1Q86UT6 975 aa16.58■□□□□ 0.24
BRCA1-223ENST00000494123 KIAA1217Q5T5P2 1943 aa16.57■□□□□ 0.24
BRCA1-223ENST00000494123 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
BRCA1-223ENST00000494123 CYP3A4P08684 503 aa16.57■□□□□ 0.24
BRCA1-223ENST00000494123 CYBAP13498 195 aa16.57■□□□□ 0.24
BRCA1-223ENST00000494123 USP11P51784 963 aa16.57■□□□□ 0.24
BRCA1-223ENST00000494123 EARS2Q5JPH6 523 aaKnown RBP16.57■□□□□ 0.24
BRCA1-223ENST00000494123 FERMT3Q86UX7 667 aa16.57■□□□□ 0.24
BRCA1-223ENST00000494123 HMX1Q9NP08 348 aaPredicted RBP16.57■□□□□ 0.24
BRCA1-223ENST00000494123 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
BRCA1-223ENST00000494123 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
BRCA1-223ENST00000494123 MYCP01106 439 aaPredicted RBP16.56■□□□□ 0.24
BRCA1-223ENST00000494123 LETM2Q2VYF4 491 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 MAP3K21Q5TCX8 1036 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 SCFD2Q8WU76 684 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 CRYGNQ8WXF5 182 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 NAP1L4Q99733 375 aaKnown RBP16.56■□□□□ 0.24
BRCA1-223ENST00000494123 KATNBL1Q9H079 304 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 ZNF865P0CJ78 1059 aaPredicted RBP16.56■□□□□ 0.24
BRCA1-223ENST00000494123 AKR1A1P14550 325 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 CCND3P30281 292 aaPredicted RBP16.56■□□□□ 0.24
BRCA1-223ENST00000494123 TTLL4Q14679 1199 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 CCDC144BQ3MJ40 725 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 CEP55Q53EZ4 464 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 TRPV1Q8NER1 839 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 INPP4AQ96PE3 977 aaPredicted RBP16.56■□□□□ 0.24
BRCA1-223ENST00000494123 MXRA8Q9BRK3 442 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 PDGFCQ9NRA1 345 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 FAM184BQ9ULE4 1060 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 UBIAD1Q9Y5Z9 338 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 MRVI1Q9Y6F6 885 aa16.56■□□□□ 0.24
BRCA1-223ENST00000494123 FIBPO43427 364 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 CCNT1O60563 726 aaKnown RBP16.55■□□□□ 0.24
BRCA1-223ENST00000494123 RGS20O76081 388 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 ITGB5P18084 799 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 ATP2B1P20020 1258 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 ADCYAP1R1P41586 468 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
BRCA1-223ENST00000494123 MTMR1Q13613 665 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 KCNV1Q6PIU1 500 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 BRAPQ7Z569 592 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 ARMC5Q96C12 935 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 GPRASP2Q96D09 838 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 CDHR1Q96JP9 859 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 WDR11Q9BZH6 1224 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 JADE2Q9NQC1 790 aa16.55■□□□□ 0.24
BRCA1-223ENST00000494123 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 SEPT4O43236 478 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 TDP2O95551 362 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 GCFC2P16383 781 aaKnown RBP16.54■□□□□ 0.24
BRCA1-223ENST00000494123 CIITAP33076 1130 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 TNFAIP2Q03169 654 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 PRR16Q569H4 304 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 FOXD4L5Q5VV16 416 aaPredicted RBP16.54■□□□□ 0.24
BRCA1-223ENST00000494123 IQSEC1Q6DN90 963 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 MOXD1Q6UVY6 613 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 PLA2G4DQ86XP0 818 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 CYP2W1Q8TAV3 490 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 FOXD4L4Q8WXT5 416 aaPredicted RBP16.54■□□□□ 0.24
BRCA1-223ENST00000494123 ZNF333Q96JL9 665 aa16.54■□□□□ 0.24
BRCA1-223ENST00000494123 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.54■□□□□ 0.24
BRCA1-223ENST00000494123 ZSCAN16Q9H4T2 348 aaPredicted RBP16.54■□□□□ 0.24
BRCA1-223ENST00000494123 MEIS1O00470 390 aa16.53■□□□□ 0.24
BRCA1-223ENST00000494123 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
BRCA1-223ENST00000494123 TXNP10599 105 aaKnown RBP16.53■□□□□ 0.24
BRCA1-223ENST00000494123 CCL5P13501 91 aa16.53■□□□□ 0.24
BRCA1-223ENST00000494123 TRAPPC10P48553 1259 aa16.53■□□□□ 0.24
BRCA1-223ENST00000494123 MTFR1Q15390 333 aa16.53■□□□□ 0.24
BRCA1-223ENST00000494123 RILPL1Q5EBL4 403 aa16.53■□□□□ 0.24
BRCA1-223ENST00000494123 COL13A1Q5TAT6 717 aaPredicted RBP16.53■□□□□ 0.24
BRCA1-223ENST00000494123 NIPA1Q7RTP0 329 aa16.53■□□□□ 0.24
BRCA1-223ENST00000494123 IPO9Q96P70 1041 aaKnown RBP16.53■□□□□ 0.24
BRCA1-223ENST00000494123 RNF208Q9H0X6 261 aa16.53■□□□□ 0.24
BRCA1-223ENST00000494123 UNC93B1Q9H1C4 597 aa16.53■□□□□ 0.24
BRCA1-223ENST00000494123 DDX25Q9UHL0 483 aaKnown RBP16.53■□□□□ 0.24
BRCA1-223ENST00000494123 HTTP42858 3142 aa16.52■□□□□ 0.24
BRCA1-223ENST00000494123 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms