RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 PKD2L1Q9P0L9 805 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 CNPY2Q9Y2B0 182 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 FRMPD4Q14CM0 1322 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 DOCK5Q9H7D0 1870 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 CCNT1O60563 726 aaKnown RBP17.93■□□□□ 0.46
HPS4-216ENST00000493455 TDP2O95551 362 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 F13A1P00488 732 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 GRK4P32298 578 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 RESTQ13127 1097 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 NBR1Q14596 966 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 PCNX4Q63HM2 1172 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 OLFML2BQ68BL8 750 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 TEX2Q8IWB9 1127 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 SH3TC2Q8TF17 1288 aa17.93■□□□□ 0.46
HPS4-216ENST00000493455 SORBS3O60504 671 aa17.92■□□□□ 0.46
HPS4-216ENST00000493455 SNAI1O95863 264 aaPredicted RBP17.92■□□□□ 0.46
HPS4-216ENST00000493455 HMGCRP04035 888 aa17.92■□□□□ 0.46
HPS4-216ENST00000493455 CNGA1P29973 690 aa17.92■□□□□ 0.46
HPS4-216ENST00000493455 MRPS9P82933 396 aaKnown RBP17.92■□□□□ 0.46
HPS4-216ENST00000493455 VSIG10LQ86VR7 867 aa17.92■□□□□ 0.46
HPS4-216ENST00000493455 TRMT44Q8IYL2 757 aaKnown RBP17.92■□□□□ 0.46
HPS4-216ENST00000493455 SLAIN1Q8ND83 568 aa17.92■□□□□ 0.46
HPS4-216ENST00000493455 SYNGAP1Q96PV0 1343 aa17.92■□□□□ 0.46
HPS4-216ENST00000493455 WNT7AO00755 349 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 INHAP05111 366 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 PRKAR2AP13861 404 aaKnown RBP17.91■□□□□ 0.46
HPS4-216ENST00000493455 EDNRBP24530 442 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 ZNF174Q15697 407 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 SLC9C1Q4G0N8 1177 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 PRR16Q569H4 304 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 TTC38Q5R3I4 469 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 MAMDC4Q6UXC1 1216 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 BRAPQ7Z569 592 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 NLRX1Q86UT6 975 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 PLA2G4DQ86XP0 818 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 CYP2W1Q8TAV3 490 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 WDR11Q9BZH6 1224 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 PDGFCQ9NRA1 345 aa17.91■□□□□ 0.46
HPS4-216ENST00000493455 FAM86B1E9PN63 330 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 EIF3JO75822 258 aaKnown RBP17.9■□□□□ 0.46
HPS4-216ENST00000493455 BRD1O95696 1058 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 CYP3A4P08684 503 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 FAM86B2P0C5J1 330 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 PDIA4P13667 645 aaKnown RBP17.9■□□□□ 0.46
HPS4-216ENST00000493455 MCM7P33993 719 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 NUCB2P80303 420 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 CEBPZQ03701 1054 aaKnown RBP17.9■□□□□ 0.46
HPS4-216ENST00000493455 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 MYSM1Q5VVJ2 828 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 MSL3Q8N5Y2 521 aaKnown RBP17.9■□□□□ 0.46
HPS4-216ENST00000493455 PXYLP1Q8TE99 480 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 MXRA8Q9BRK3 442 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 ZSCAN16Q9H4T2 348 aaPredicted RBP17.9■□□□□ 0.46
HPS4-216ENST00000493455 PRDM10Q9NQV6 1147 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 ZDHHC9Q9Y397 364 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 MRVI1Q9Y6F6 885 aa17.9■□□□□ 0.46
HPS4-216ENST00000493455 LOC102724159A0A0B4J2E5 919 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 MARCH6O60337 910 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 ITGB5P18084 799 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 DDIT3P35638 169 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 ADCYAP1R1P41586 468 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 USP11P51784 963 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 CACNB2Q08289 660 aaPredicted RBP17.89■□□□□ 0.45
HPS4-216ENST00000493455 MTMR1Q13613 665 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 PWP2Q15269 919 aaKnown RBP17.89■□□□□ 0.45
HPS4-216ENST00000493455 GNPTABQ3T906 1256 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 CEP55Q53EZ4 464 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 XRRA1Q6P2D8 792 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 FBXO46Q6PJ61 603 aaPredicted RBP17.89■□□□□ 0.45
HPS4-216ENST00000493455 MORC4Q8TE76 937 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 ABHD16BQ9H3Z7 469 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 VTA1Q9NP79 307 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 DDX25Q9UHL0 483 aaKnown RBP17.89■□□□□ 0.45
HPS4-216ENST00000493455 PCDHB6Q9Y5E3 794 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 UBIAD1Q9Y5Z9 338 aa17.89■□□□□ 0.45
HPS4-216ENST00000493455 SLC37A4O43826 429 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 EDIL3O43854 480 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 RGS20O76081 388 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 ARP10275 920 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 NCLP19338 710 aaKnown RBP17.88■□□□□ 0.45
HPS4-216ENST00000493455 CCND3P30281 292 aaPredicted RBP17.88■□□□□ 0.45
HPS4-216ENST00000493455 TOB1P50616 345 aaPredicted RBP17.88■□□□□ 0.45
HPS4-216ENST00000493455 RILPL1Q5EBL4 403 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 ANO1Q5XXA6 986 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 TRPV1Q8NER1 839 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 CRYGNQ8WXF5 182 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 NAP1L4Q99733 375 aaKnown RBP17.88■□□□□ 0.45
HPS4-216ENST00000493455 FTOQ9C0B1 505 aaKnown RBP eCLIP17.88■□□□□ 0.45
HPS4-216ENST00000493455 CHMP5Q9NZZ3 219 aa17.88■□□□□ 0.45
HPS4-216ENST00000493455 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.87■□□□□ 0.45
HPS4-216ENST00000493455 DDX39AO00148 427 aaKnown RBP17.87■□□□□ 0.45
HPS4-216ENST00000493455 STAM2O75886 525 aa17.87■□□□□ 0.45
HPS4-216ENST00000493455 CYBAP13498 195 aa17.87■□□□□ 0.45
HPS4-216ENST00000493455 PTGS1P23219 599 aa17.87■□□□□ 0.45
HPS4-216ENST00000493455 CCDC144BQ3MJ40 725 aa17.87■□□□□ 0.45
HPS4-216ENST00000493455 GJA10Q969M2 543 aa17.87■□□□□ 0.45
HPS4-216ENST00000493455 LENG1Q96BZ8 264 aaPredicted RBP17.87■□□□□ 0.45
HPS4-216ENST00000493455 CHAMP1Q96JM3 812 aa17.87■□□□□ 0.45
HPS4-216ENST00000493455 JADE2Q9NQC1 790 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms