RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 NECAB2Q7Z6G3 386 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 WDR11Q9BZH6 1224 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 MOXD2PA6NHM9 499 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 LARGE1O95461 756 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-212ENST00000489728 LRRC41Q15345 812 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 CCDC62Q6P9F0 684 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 EEPD1Q7L9B9 569 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 TLK2Q86UE8 772 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 REXO1Q8N1G1 1221 aaKnown RBP12.69□□□□□ -0.38
CPSF7-212ENST00000489728 PCSK9Q8NBP7 692 aaKnown RBP12.69□□□□□ -0.38
CPSF7-212ENST00000489728 DAGLBQ8NCG7 672 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 KLHDC9Q8NEP7 349 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 CDHR1Q96JP9 859 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 INPP4AQ96PE3 977 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-212ENST00000489728 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 AP5M1Q9H0R1 490 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 PCDHA6Q9UN73 950 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 PCDHA8Q9Y5H6 950 aa12.69□□□□□ -0.38
CPSF7-212ENST00000489728 ADCY6O43306 1168 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 FIBPO43427 364 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 ZEB2O60315 1214 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 SMPD1P17405 629 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 ICAM3P32942 547 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 SREBF1P36956 1147 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 CPT1AP50416 773 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 HMGN5P82970 282 aaKnown RBP12.68□□□□□ -0.38
CPSF7-212ENST00000489728 UBE2SQ16763 222 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 BRDTQ58F21 947 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-212ENST00000489728 NOL8Q76FK4 1167 aaKnown RBP12.68□□□□□ -0.38
CPSF7-212ENST00000489728 NECAB1Q8N987 351 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 NSUN7Q8NE18 718 aaKnown RBP12.68□□□□□ -0.38
CPSF7-212ENST00000489728 IL31RAQ8NI17 732 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 EMID1Q96A84 441 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-212ENST00000489728 ANO3Q9BYT9 981 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 C11orf49Q9H6J7 331 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 PDGFCQ9NRA1 345 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 VPS54Q9P1Q0 977 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 ORC3Q9UBD5 711 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-212ENST00000489728 PHF24Q9UPV7 400 aa12.68□□□□□ -0.38
CPSF7-212ENST00000489728 MKI67P46013 3256 aaKnown RBP12.68□□□□□ -0.38
CPSF7-212ENST00000489728 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-212ENST00000489728 MAFGO15525 162 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 CABYRO75952 493 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 RGS20O76081 388 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 PGK1P00558 417 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 TXNP10599 105 aaKnown RBP12.67□□□□□ -0.38
CPSF7-212ENST00000489728 MYCLP12524 364 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-212ENST00000489728 NLRP5P59047 1200 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 MRPS9P82933 396 aaKnown RBP12.67□□□□□ -0.38
CPSF7-212ENST00000489728 ANO1Q5XXA6 986 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 CCSAPQ6IQ19 270 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-212ENST00000489728 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 GPRASP2Q96D09 838 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 PAWRQ96IZ0 340 aaKnown RBP12.67□□□□□ -0.38
CPSF7-212ENST00000489728 SEZ6LQ9BYH1 1024 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 PCDHA4Q9UN74 947 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
CPSF7-212ENST00000489728 DDX49Q9Y6V7 483 aaKnown RBP12.67□□□□□ -0.38
CPSF7-212ENST00000489728 CTAGE5O15320 804 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 KPNA6O60684 536 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 GH1P01241 217 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 C6orf222P0C671 652 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-212ENST00000489728 ST3GAL1Q11201 340 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 FSCN1Q16658 493 aaKnown RBP12.66□□□□□ -0.38
CPSF7-212ENST00000489728 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 GJC2Q5T442 439 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-212ENST00000489728 C1orf53Q5VUE5 145 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 SEPT14Q6ZU15 432 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 NIPA1Q7RTP0 329 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 GIMAP8Q8ND71 665 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-212ENST00000489728 DIS3LQ8TF46 1054 aaKnown RBP12.66□□□□□ -0.38
CPSF7-212ENST00000489728 CRYGNQ8WXF5 182 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 LENG1Q96BZ8 264 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-212ENST00000489728 SENP7Q9BQF6 1050 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 PHF20Q9BVI0 1012 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
CPSF7-212ENST00000489728 KIF3AQ9Y496 699 aa12.66□□□□□ -0.38
CPSF7-212ENST00000489728 ELP1O95163 1332 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 A6NJR5 290 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 SPATA31C2B4DYI2 1134 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 DYNC1LI2O43237 492 aaPredicted RBP12.65□□□□□ -0.38
CPSF7-212ENST00000489728 ARIH2O95376 493 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 CYP3A4P08684 503 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 FDPSP14324 419 aaKnown RBP12.65□□□□□ -0.38
CPSF7-212ENST00000489728 ACLYP53396 1101 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 ARHGAP4P98171 946 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 LAMC2Q13753 1193 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 NEDD9Q14511 834 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 CCDC83Q8IWF9 413 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 BLIDQ8IZY5 108 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 OR6J1Q8NGC5 347 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 BRMS1Q9HCU9 246 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 JADE2Q9NQC1 790 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 UBIAD1Q9Y5Z9 338 aa12.65□□□□□ -0.38
CPSF7-212ENST00000489728 A0A1W2PQ45 241 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-212ENST00000489728 A0A1W2PQY0 241 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms