RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 BRDTQ58F21 947 aaPredicted RBP16.21■□□□□ 0.19
VTI1A-206ENST00000489142 MFSD5Q6N075 450 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 GPKOWQ92917 476 aaPredicted RBP eCLIP16.21■□□□□ 0.19
VTI1A-206ENST00000489142 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 MTA3Q9BTC8 594 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 ALDH8A1Q9H2A2 487 aaPredicted RBP16.21■□□□□ 0.19
VTI1A-206ENST00000489142 HIPK3Q9H422 1215 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 MRVI1Q9Y6F6 885 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 SCN5AQ14524 2016 aa16.21■□□□□ 0.18
VTI1A-206ENST00000489142 NEFLP07196 543 aa16.2■□□□□ 0.18
VTI1A-206ENST00000489142 MMP3P08254 477 aa16.2■□□□□ 0.18
VTI1A-206ENST00000489142 CYP2C9P11712 490 aa16.2■□□□□ 0.18
VTI1A-206ENST00000489142 C16orf59Q7L2K0 433 aa16.2■□□□□ 0.18
VTI1A-206ENST00000489142 TMTC2Q8N394 836 aa16.2■□□□□ 0.18
VTI1A-206ENST00000489142 MAP3K14Q99558 947 aa16.2■□□□□ 0.18
VTI1A-206ENST00000489142 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.2■□□□□ 0.187e-9■■□□□ 12.4
VTI1A-206ENST00000489142 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
VTI1A-206ENST00000489142 DDX41Q9UJV9 622 aaKnown RBP16.2■□□□□ 0.18
VTI1A-206ENST00000489142 COL6A3P12111 3177 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 RBAK-RBAKDNI3L0D1 243 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 CCND2P30279 289 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 TRAF1Q13077 416 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 PPIGQ13427 754 aaKnown RBP eCLIP16.19■□□□□ 0.186e-13■□□□□ 8.8
VTI1A-206ENST00000489142 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 USP17L6PQ6QN14 398 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 TMTC3Q6ZXV5 915 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 TMEM199Q8N511 208 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 FANCBQ8NB91 859 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 NOC4LQ9BVI4 516 aaKnown RBP16.19■□□□□ 0.18
VTI1A-206ENST00000489142 WNT8AQ9H1J5 351 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 MAP3K20Q9NYL2 800 aaKnown RBP16.19■□□□□ 0.18
VTI1A-206ENST00000489142 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
VTI1A-206ENST00000489142 ZNF286BP0CG31 522 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 CALM1P0DP23 149 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 CALM2P0DP24 149 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 CALM3P0DP25 149 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 GNAQP50148 359 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 EXOSC10Q01780 885 aaKnown RBP16.18■□□□□ 0.18
VTI1A-206ENST00000489142 TMEM240Q5SV17 173 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 FAM109BQ6ICB4 259 aaPredicted RBP16.18■□□□□ 0.18
VTI1A-206ENST00000489142 APOA5Q6Q788 366 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 DHX32Q7L7V1 743 aaKnown RBP16.18■□□□□ 0.18
VTI1A-206ENST00000489142 VSIG10LQ86VR7 867 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 SGMS1Q86VZ5 419 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 SMARCC2Q8TAQ2 1214 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 SCLYQ96I15 445 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 MTMR10Q9NXD2 777 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 NAP1L2Q9ULW6 460 aaPredicted RBP16.18■□□□□ 0.18
VTI1A-206ENST00000489142 TRIP12Q14669 1992 aaPredicted RBP16.18■□□□□ 0.18
VTI1A-206ENST00000489142 GBF1Q92538 1859 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 TANC1Q9C0D5 1861 aa16.18■□□□□ 0.18
VTI1A-206ENST00000489142 KPNA6O60684 536 aa16.17■□□□□ 0.18
VTI1A-206ENST00000489142 UBA1P22314 1058 aaKnown RBP16.17■□□□□ 0.18
VTI1A-206ENST00000489142 MRPS9P82933 396 aaKnown RBP16.17■□□□□ 0.18
VTI1A-206ENST00000489142 SP2Q02086 613 aa16.17■□□□□ 0.18
VTI1A-206ENST00000489142 UBE2SQ16763 222 aa16.17■□□□□ 0.18
VTI1A-206ENST00000489142 ZNF365Q70YC5 407 aa16.17■□□□□ 0.18
VTI1A-206ENST00000489142 DHX37Q8IY37 1157 aaKnown RBP16.17■□□□□ 0.18
VTI1A-206ENST00000489142 SAMD3Q8N6K7 520 aa16.17■□□□□ 0.18
VTI1A-206ENST00000489142 KAT2BQ92831 832 aa16.17■□□□□ 0.18
VTI1A-206ENST00000489142 BCAS3Q9H6U6 928 aa16.17■□□□□ 0.18
VTI1A-206ENST00000489142 RTEL1Q9NZ71 1219 aa16.17■□□□□ 0.18
VTI1A-206ENST00000489142 CNTNAP5Q8WYK1 1306 aa16.17■□□□□ 0.18
VTI1A-206ENST00000489142 KLF18A0A0U1RQI7 1052 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 GRXCR1A8MXD5 290 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 MEIS2O14770 477 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 GGPS1O95749 300 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 SMARCA1P28370 1054 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 TSGA10IPQ3SY00 556 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 ZNF697Q5TEC3 545 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 NFRKBQ6P4R8 1299 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 SYNE3Q6ZMZ3 975 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 HEATR3Q7Z4Q2 680 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 CUL5Q93034 780 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 JAKMIP1Q96N16 626 aaKnown RBP16.16■□□□□ 0.18
VTI1A-206ENST00000489142 GUCD1Q96NT3 240 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 ALG1Q9BT22 464 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 SEZ6LQ9BYH1 1024 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 IL23AQ9NPF7 189 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 FRMPD4Q14CM0 1322 aa16.16■□□□□ 0.18
VTI1A-206ENST00000489142 ZBTB43O43298 467 aa16.15■□□□□ 0.18
VTI1A-206ENST00000489142 CASTP20810 708 aaKnown RBP16.15■□□□□ 0.18
VTI1A-206ENST00000489142 SMAD3P84022 425 aaKnown RBP16.15■□□□□ 0.18
VTI1A-206ENST00000489142 DGKDQ16760 1214 aa16.15■□□□□ 0.18
VTI1A-206ENST00000489142 RTN1Q16799 776 aa16.15■□□□□ 0.18
VTI1A-206ENST00000489142 HSDL1Q3SXM5 330 aa16.15■□□□□ 0.18
VTI1A-206ENST00000489142 CELF3Q5SZQ8 465 aaKnown RBP16.15■□□□□ 0.18
VTI1A-206ENST00000489142 MYSM1Q5VVJ2 828 aa16.15■□□□□ 0.18
VTI1A-206ENST00000489142 PPTC7Q8NI37 304 aa16.15■□□□□ 0.18
VTI1A-206ENST00000489142 EMID1Q96A84 441 aaPredicted RBP16.15■□□□□ 0.18
VTI1A-206ENST00000489142 SPATA33Q96N06 139 aa16.15■□□□□ 0.18
VTI1A-206ENST00000489142 GOLGA8AA7E2F4 631 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 SUPT20HL2P0C7V6 817 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 HSPA4P34932 840 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 FGD1P98174 961 aa16.14■□□□□ 0.17
VTI1A-206ENST00000489142 APOBRQ0VD83 1088 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms