RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 CCND2P30279 289 aa20.17■□□□□ 0.82
ATG3-205ENST00000488910 LY6KQ17RY6 165 aa20.17■□□□□ 0.82
ATG3-205ENST00000488910 MICU3Q86XE3 530 aa20.17■□□□□ 0.82
ATG3-205ENST00000488910 CUL5Q93034 780 aa20.17■□□□□ 0.82
ATG3-205ENST00000488910 PIK3CDO00329 1044 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 ZBTB43O43298 467 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 TGFB3P10600 412 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 RCAN1P53805 252 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 PSMC6P62333 389 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 FPGSQ05932 587 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 MFSD5Q6N075 450 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 RAB11FIP4Q86YS3 637 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 CMTR1Q8N1G2 835 aaKnown RBP20.16■□□□□ 0.82
ATG3-205ENST00000488910 EMID1Q96A84 441 aaPredicted RBP20.16■□□□□ 0.82
ATG3-205ENST00000488910 TCEANC2Q96MN5 208 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 BRPF3Q9ULD4 1205 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 SNX14Q9Y5W7 946 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 MRVI1Q9Y6F6 885 aa20.16■□□□□ 0.82
ATG3-205ENST00000488910 STAM2O75886 525 aa20.15■□□□□ 0.82
ATG3-205ENST00000488910 FGD1P98174 961 aa20.15■□□□□ 0.82
ATG3-205ENST00000488910 ARHGAP1Q07960 439 aa20.15■□□□□ 0.82
ATG3-205ENST00000488910 LAMC2Q13753 1193 aa20.15■□□□□ 0.82
ATG3-205ENST00000488910 SHHQ15465 462 aa20.15■□□□□ 0.82
ATG3-205ENST00000488910 CCDC82Q8N4S0 544 aa20.15■□□□□ 0.82
ATG3-205ENST00000488910 SMARCC2Q8TAQ2 1214 aa20.15■□□□□ 0.82
ATG3-205ENST00000488910 AFG1LQ8WV93 481 aa20.15■□□□□ 0.82
ATG3-205ENST00000488910 LRCH3Q96II8 777 aa20.15■□□□□ 0.82
ATG3-205ENST00000488910 JAKMIP1Q96N16 626 aaKnown RBP20.15■□□□□ 0.82
ATG3-205ENST00000488910 FRMPD4Q14CM0 1322 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 RGS20O76081 388 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 SUPT20HL2P0C7V6 817 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 PSMA5P28066 241 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 RTN1Q16799 776 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 XRRA1Q6P2D8 792 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 NFRKBQ6P4R8 1299 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 BLOC1S2Q6QNY1 142 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 FBXL16Q8N461 479 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 TMEM199Q8N511 208 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 ALDH8A1Q9H2A2 487 aaPredicted RBP20.14■□□□□ 0.81
ATG3-205ENST00000488910 PSTPIP2Q9H939 334 aa20.14■□□□□ 0.81
ATG3-205ENST00000488910 KLF18A0A0U1RQI7 1052 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 MEIS2O14770 477 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 B4GALT4O60513 344 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 MMP3P08254 477 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 CASTP20810 708 aaKnown RBP20.13■□□□□ 0.81
ATG3-205ENST00000488910 PTPN11Q06124 597 aaPredicted RBP20.13■□□□□ 0.81
ATG3-205ENST00000488910 DGKDQ16760 1214 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 NBPF20Q3BBV1 942 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 USP17L6PQ6QN14 398 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 DHX37Q8IY37 1157 aaKnown RBP20.13■□□□□ 0.81
ATG3-205ENST00000488910 IL31RAQ8NI17 732 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 TRPV6Q9H1D0 765 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 SCN10AQ9Y5Y9 1956 aa20.13■□□□□ 0.81
ATG3-205ENST00000488910 PPIGQ13427 754 aaKnown RBP eCLIP20.12■□□□□ 0.81
ATG3-205ENST00000488910 GNPTABQ3T906 1256 aa20.12■□□□□ 0.81
ATG3-205ENST00000488910 C9orf50Q5SZB4 431 aa20.12■□□□□ 0.81
ATG3-205ENST00000488910 Q6ZUG5 572 aa20.12■□□□□ 0.81
ATG3-205ENST00000488910 TEX2Q8IWB9 1127 aa20.12■□□□□ 0.81
ATG3-205ENST00000488910 PPTC7Q8NI37 304 aa20.12■□□□□ 0.81
ATG3-205ENST00000488910 HIPK3Q9H422 1215 aa20.12■□□□□ 0.81
ATG3-205ENST00000488910 MYH7BA7E2Y1 1941 aa20.12■□□□□ 0.81
ATG3-205ENST00000488910 CCDC196A0A1B0GTZ2 297 aa20.11■□□□□ 0.81
ATG3-205ENST00000488910 hCG_1642624A0A1W2PR95 340 aa20.11■□□□□ 0.81
ATG3-205ENST00000488910 GOLGA8AA7E2F4 631 aa20.11■□□□□ 0.81
ATG3-205ENST00000488910 GOLGA8BA8MQT2 603 aa20.11■□□□□ 0.81
ATG3-205ENST00000488910 EPHB4P54760 987 aa20.11■□□□□ 0.81
ATG3-205ENST00000488910 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
ATG3-205ENST00000488910 FUT2Q10981 343 aa20.11■□□□□ 0.81
ATG3-205ENST00000488910 CELF3Q5SZQ8 465 aaKnown RBP20.11■□□□□ 0.81
ATG3-205ENST00000488910 MYSM1Q5VVJ2 828 aa20.11■□□□□ 0.81
ATG3-205ENST00000488910 LAMA2P24043 3122 aaKnown RBP20.11■□□□□ 0.81
ATG3-205ENST00000488910 CNTNAP5Q8WYK1 1306 aa20.1■□□□□ 0.81
ATG3-205ENST00000488910 PPFIA4O75335 1185 aa20.1■□□□□ 0.81
ATG3-205ENST00000488910 CPA1P15085 419 aa20.1■□□□□ 0.81
ATG3-205ENST00000488910 RPS6KB1P23443 525 aa20.1■□□□□ 0.81
ATG3-205ENST00000488910 ICAM3P32942 547 aa20.1■□□□□ 0.81
ATG3-205ENST00000488910 PCNX4Q63HM2 1172 aa20.1■□□□□ 0.81
ATG3-205ENST00000488910 HEATR3Q7Z4Q2 680 aa20.1■□□□□ 0.81
ATG3-205ENST00000488910 INPP4AQ96PE3 977 aaPredicted RBP20.1■□□□□ 0.81
ATG3-205ENST00000488910 USP26Q9BXU7 913 aa20.1■□□□□ 0.81
ATG3-205ENST00000488910 PPP1R12CQ9BZL4 782 aa20.1■□□□□ 0.81
ATG3-205ENST00000488910 FAM217BQ9NTX9 383 aaPredicted RBP20.1■□□□□ 0.81
ATG3-205ENST00000488910 V9GY48 417 aaPredicted RBP20.1■□□□□ 0.81
ATG3-205ENST00000488910 GGPS1O95749 300 aa20.09■□□□□ 0.81
ATG3-205ENST00000488910 CYP2C18P33260 490 aa20.09■□□□□ 0.81
ATG3-205ENST00000488910 METAP2P50579 478 aaKnown RBP eCLIP20.09■□□□□ 0.81
ATG3-205ENST00000488910 SP2Q02086 613 aa20.09■□□□□ 0.81
ATG3-205ENST00000488910 FAM47CQ5HY64 1035 aa20.09■□□□□ 0.81
ATG3-205ENST00000488910 BRF1Q92994 677 aa20.09■□□□□ 0.81
ATG3-205ENST00000488910 NOC4LQ9BVI4 516 aaKnown RBP20.09■□□□□ 0.81
ATG3-205ENST00000488910 KATNAL1Q9BW62 490 aa20.09■□□□□ 0.81
ATG3-205ENST00000488910 AGXT2Q9BYV1 514 aa20.09■□□□□ 0.81
ATG3-205ENST00000488910 TRMT13Q9NUP7 481 aaKnown RBP20.09■□□□□ 0.81
ATG3-205ENST00000488910 NAP1L2Q9ULW6 460 aaPredicted RBP20.09■□□□□ 0.81
ATG3-205ENST00000488910 SPATA31C2B4DYI2 1134 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 hCG_1984214I3L0E3 225 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 HOXD8P13378 290 aaPredicted RBP20.08■□□□□ 0.81
ATG3-205ENST00000488910 CSF2RAP15509 400 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 UBA1P22314 1058 aaKnown RBP20.08■□□□□ 0.81
ATG3-205ENST00000488910 CDC27P30260 824 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms