RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CALM3P0DP25 149 aa20.56■□□□□ 0.88
COL16A1-215ENST00000488897 GSDMAQ96QA5 445 aa20.56■□□□□ 0.88
COL16A1-215ENST00000488897 CTAGE1Q96RT6 745 aa20.56■□□□□ 0.88
COL16A1-215ENST00000488897 NAA15Q9BXJ9 866 aaKnown RBP20.56■□□□□ 0.88
COL16A1-215ENST00000488897 BTBD19C9JJ37 291 aa20.56■□□□□ 0.88
COL16A1-215ENST00000488897 ATP8B1O43520 1251 aa20.56■□□□□ 0.88
COL16A1-215ENST00000488897 ZRANB2O95218 330 aaKnown RBP eCLIP20.56■□□□□ 0.88
COL16A1-215ENST00000488897 GPAT2Q6NUI2 795 aa20.56■□□□□ 0.88
COL16A1-215ENST00000488897 PAGE5Q96GU1 130 aa20.56■□□□□ 0.88
COL16A1-215ENST00000488897 SMCHD1A6NHR9 2005 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 PTPRFP10586 1907 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 A0A0G2JLL6 359 aaPredicted RBP20.55■□□□□ 0.88
COL16A1-215ENST00000488897 KLRF2D3W0D1 207 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 SLC10A3P09131 477 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 PNMA6AP0CW24 399 aaPredicted RBP20.55■□□□□ 0.88
COL16A1-215ENST00000488897 BMP3P12645 472 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 FUT2Q10981 343 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 PRRT2Q7Z6L0 340 aaPredicted RBP20.55■□□□□ 0.88
COL16A1-215ENST00000488897 WDR24Q96S15 920 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 GOPCQ9HD26 462 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 FLOT1O75955 427 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 ZNF543Q08ER8 600 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 SNAPC2Q13487 334 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 PPFIBP1Q86W92 1011 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 EPSTI1Q96J88 318 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 TMOD4Q9NZQ9 345 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 KCNH4Q9UQ05 1017 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 MRFAP1Q9Y605 127 aa20.55■□□□□ 0.88
COL16A1-215ENST00000488897 V9GY48 417 aaPredicted RBP20.55■□□□□ 0.88
COL16A1-215ENST00000488897 PARP1P09874 1014 aaKnown RBP20.54■□□□□ 0.88
COL16A1-215ENST00000488897 CCDC175P0C221 793 aa20.54■□□□□ 0.88
COL16A1-215ENST00000488897 AFMP43652 599 aa20.54■□□□□ 0.88
COL16A1-215ENST00000488897 CUL4BQ13620 913 aa20.54■□□□□ 0.88
COL16A1-215ENST00000488897 FILIP1LQ4L180 1135 aa20.54■□□□□ 0.88
COL16A1-215ENST00000488897 GPR161Q8N6U8 529 aaKnown RBP20.54■□□□□ 0.88
COL16A1-215ENST00000488897 SYMPKQ92797 1274 aaKnown RBP20.54■□□□□ 0.88
COL16A1-215ENST00000488897 SHISA4Q96DD7 197 aa20.54■□□□□ 0.88
COL16A1-215ENST00000488897 SYNRGQ9UMZ2 1314 aa20.54■□□□□ 0.88
COL16A1-215ENST00000488897 APTXQ7Z2E3 356 aaKnown RBP20.54■□□□□ 0.88
COL16A1-215ENST00000488897 A0A087X0B3 334 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 FAM205CA6NFA0 338 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 PPP2R3AQ06190 1150 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 DPYDQ12882 1025 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 GMCL1P1Q8NEA9 526 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 P2RX7Q99572 595 aaKnown RBP20.53■□□□□ 0.88
COL16A1-215ENST00000488897 DDAH1O94760 285 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 SNHG28P0DPA3 235 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 EARS2Q5JPH6 523 aaKnown RBP20.53■□□□□ 0.88
COL16A1-215ENST00000488897 CDKAL1Q5VV42 579 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 TAF3Q5VWG9 929 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 CCDC174Q6PII3 467 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 CPXCR1Q8N123 301 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 IGSF22Q8N9C0 903 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 CTCFLQ8NI51 663 aaPredicted RBP20.53■□□□□ 0.88
COL16A1-215ENST00000488897 ATG4CQ96DT6 458 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 TSKSQ9UJT2 592 aa20.53■□□□□ 0.88
COL16A1-215ENST00000488897 PALM3A6NDB9 673 aaPredicted RBP20.52■□□□□ 0.88
COL16A1-215ENST00000488897 RASSF10A6NK89 507 aa20.52■□□□□ 0.88
COL16A1-215ENST00000488897 PDHXO00330 501 aa20.52■□□□□ 0.88
COL16A1-215ENST00000488897 GRM4Q14833 912 aa20.52■□□□□ 0.88
COL16A1-215ENST00000488897 ADGRF4Q8IZF3 695 aa20.52■□□□□ 0.88
COL16A1-215ENST00000488897 PYM1Q9BRP8 204 aaKnown RBP20.52■□□□□ 0.88
COL16A1-215ENST00000488897 ADD3Q9UEY8 706 aaKnown RBP20.52■□□□□ 0.88
COL16A1-215ENST00000488897 CXCL11O14625 94 aa20.52■□□□□ 0.87
COL16A1-215ENST00000488897 TEX33O43247 280 aa20.52■□□□□ 0.87
COL16A1-215ENST00000488897 CD44P16070 742 aaKnown RBP20.52■□□□□ 0.87
COL16A1-215ENST00000488897 PBX1P40424 430 aa20.52■□□□□ 0.87
COL16A1-215ENST00000488897 TTC38Q5R3I4 469 aa20.52■□□□□ 0.87
COL16A1-215ENST00000488897 KLHL10Q6JEL2 608 aa20.52■□□□□ 0.87
COL16A1-215ENST00000488897 PIGSQ96S52 555 aa20.52■□□□□ 0.87
COL16A1-215ENST00000488897 DESI2Q9BSY9 194 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 PPP1R3GB7ZBB8 358 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 C19orf81C9J6K1 198 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 HSPA6P17066 643 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 PLA2G4AP47712 749 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 GTF2A2P52657 109 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 STX17P56962 302 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 RBL2Q08999 1139 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 ZNF174Q15697 407 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 CCDC178Q5BJE1 867 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 TMTC3Q6ZXV5 915 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 RSRC2Q7L4I2 434 aaKnown RBP20.51■□□□□ 0.87
COL16A1-215ENST00000488897 GPKOWQ92917 476 aaPredicted RBP eCLIP20.51■□□□□ 0.87
COL16A1-215ENST00000488897 TNFRSF25Q93038 417 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 PAGR1Q9BTK6 254 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 ASCC2Q9H1I8 757 aaPredicted RBP20.51■□□□□ 0.87
COL16A1-215ENST00000488897 SH2D4AQ9H788 454 aa20.51■□□□□ 0.87
COL16A1-215ENST00000488897 ADAMTS3O15072 1205 aa20.5■□□□□ 0.87
COL16A1-215ENST00000488897 ATP2C1P98194 919 aaPredicted RBP20.5■□□□□ 0.87
COL16A1-215ENST00000488897 SH3D19Q5HYK7 790 aa20.5■□□□□ 0.87
COL16A1-215ENST00000488897 CCDC12Q8WUD4 166 aaPredicted RBP20.5■□□□□ 0.87
COL16A1-215ENST00000488897 RABGGTAQ92696 567 aa20.5■□□□□ 0.87
COL16A1-215ENST00000488897 CCDC51Q96ER9 411 aa20.5■□□□□ 0.87
COL16A1-215ENST00000488897 PRR12Q9ULL5 1215 aa20.5■□□□□ 0.87
COL16A1-215ENST00000488897 ZBTB48P10074 688 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-215ENST00000488897 USP14P54578 494 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 USH1GQ495M9 461 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 CATSPERGQ6ZRH7 1159 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 IQUBQ8NA54 791 aa20.49■□□□□ 0.87
COL16A1-215ENST00000488897 GMCL1Q96IK5 515 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms