RNA–Protein interactions for RNA: ENST00000488741.5

CREM-238, Transcript of cAMP responsive element modulator, human

TSL 2 BASIC

Gene CREM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-238	ENST00000488741	RAB11FIP4	Q86YS3	637 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	TBC1D10C	Q8IV04	446 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	FAM114A1	Q8IWE2	563 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	MREG	Q8N565	214 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	EIF1AD	Q8N9N8	165 aa	Known RBP	5.71	□□□□□ -1.5
CREM-238	ENST00000488741	SECISBP2L	Q93073	1101 aa	Known RBP	5.71	□□□□□ -1.5
CREM-238	ENST00000488741	LRRC59	Q96AG4	307 aa	Known RBP	5.71	□□□□□ -1.5
CREM-238	ENST00000488741	C1QTNF2	Q9BXJ5	285 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	PUS7L	Q9H0K6	701 aa	Known RBP	5.71	□□□□□ -1.5
CREM-238	ENST00000488741	EPN3	Q9H201	632 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	VPS16	Q9H269	839 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	PLEKHA4	Q9H4M7	779 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	VCPKMT	Q9H867	229 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	TAB2	Q9NYJ8	693 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	PLA2G2E	Q9NZK7	142 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.71	□□□□□ -1.5
CREM-238	ENST00000488741	SUFU	Q9UMX1	484 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	SNX12	Q9UMY4	172 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	REXO2	Q9Y3B8	237 aa	Known RBP	5.71	□□□□□ -1.5
CREM-238	ENST00000488741	HYOU1	Q9Y4L1	999 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	PCDHB6	Q9Y5E3	794 aa		5.71	□□□□□ -1.5
CREM-238	ENST00000488741	SOS2	Q07890	1332 aa	Predicted RBP	5.71	□□□□□ -1.5
CREM-238	ENST00000488741	PDS5A	Q29RF7	1337 aa	Known RBP	5.71	□□□□□ -1.5
CREM-238	ENST00000488741	CHD4	Q14839	1912 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	RTL9	Q8NET4	1388 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	TTC26	A0AVF1	554 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ICMT	O60725	284 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	PARP1	P09874	1014 aa	Known RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	UQCRFS1P1	P0C7P4	283 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	SRGN	P10124	158 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	PHKG2	P15735	406 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	TAT	P17735	454 aa	Predicted RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	GNAT2	P19087	354 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ELF1	P32519	619 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	NF2	P35240	595 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ZAP70	P43403	619 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	AFM	P43652	599 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	TRAPPC10	P48553	1259 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	TDO2	P48775	406 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	CDR1	P51861	262 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	NAP1L1	P55209	391 aa	Known RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ZBED6	P86452	979 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	SATB1	Q01826	763 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	GRIN1	Q05586	938 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ACTN3	Q08043	901 aa	Predicted RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	USP4	Q13107	963 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	KCNB1	Q14721	858 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	CRYM	Q14894	314 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	WTAP	Q15007	396 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	SPA17	Q15506	151 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	CCDC57	Q2TAC2	916 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	LRRC24	Q50LG9	513 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	WLS	Q5T9L3	541 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	CCDC181	Q5TID7	509 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	FBXW10	Q5XX13	1052 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	PPP4R3A	Q6IN85	833 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	LRIG3	Q6UXM1	1119 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ANKLE2	Q86XL3	938 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	NPAS4	Q8IUM7	802 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	GLYCTK	Q8IVS8	523 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	IFT20	Q8IY31	132 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	GRAMD1C	Q8IYS0	662 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	IFNL2	Q8IZJ0	200 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	C1orf216	Q8TAB5	229 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ZNF507	Q8TCN5	953 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ZNF473	Q8WTR7	871 aa	Known RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	NELFB	Q8WX92	580 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	RIN2	Q8WYP3	895 aa	Predicted RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	RAPGEF4	Q8WZA2	1011 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	CCDC47	Q96A33	483 aa	Known RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ZNF496	Q96IT1	587 aa	Predicted RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ALS2CR12	Q96Q35	445 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	KCTD15	Q96SI1	283 aa	Predicted RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	CHP1	Q99653	195 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	PLA2G12B	Q9BX93	195 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	RNF41	Q9H4P4	317 aa	Predicted RBP	5.7	□□□□□ -1.5
CREM-238	ENST00000488741	VEZT	Q9HBM0	779 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	KLC4	Q9NSK0	619 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	ZNF358	Q9NW07	568 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	MCM8	Q9UJA3	840 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741	GLI3	P10071	1580 aa		5.7	□□□□□ -1.5
CREM-238	ENST00000488741		A0A087X0B3	334 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	BICDL2	A1A5D9	508 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	GRID2IP	A4D2P6	1211 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	ERVH48-1	M5A8F1	160 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	ENC1	O14682	589 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	PTCD1	O75127	700 aa	Known RBP	5.69	□□□□□ -1.5
CREM-238	ENST00000488741	RASSF9	O75901	435 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	FAM107A	O95990	144 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	GC	P02774	474 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	TFRC	P02786	760 aa	Known RBP	5.69	□□□□□ -1.5
CREM-238	ENST00000488741	MYBL2	P10244	700 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	EZR	P15311	586 aa	Known RBP	5.69	□□□□□ -1.5
CREM-238	ENST00000488741	GCFC2	P16383	781 aa	Known RBP	5.69	□□□□□ -1.5
CREM-238	ENST00000488741	RXRA	P19793	462 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	NR1D1	P20393	614 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	MAPK1	P28482	360 aa		5.69	□□□□□ -1.5
CREM-238	ENST00000488741	SLC8A1	P32418	973 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms