RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 ZNF654Q8IZM8 581 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 ZNF713Q8N859 430 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-226ENST00000486021 HERVK_113Q902F9 699 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 SYMPKQ92797 1274 aaKnown RBP8.63□□□□□ -1.03
CPNE1-226ENST00000486021 EMID1Q96A84 441 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-226ENST00000486021 MTMR8Q96EF0 704 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 TAAR1Q96RJ0 339 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 SPZ1Q9BXG8 430 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 ALDH8A1Q9H2A2 487 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-226ENST00000486021 SLC28A3Q9HAS3 691 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 SLC4A7Q9Y6M7 1214 aa8.63□□□□□ -1.03
CPNE1-226ENST00000486021 BAZ2BQ9UIF8 2168 aaKnown RBP8.63□□□□□ -1.03
CPNE1-226ENST00000486021 ASTN1O14525 1302 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 SPDYE3A6NKU9 549 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 ZBBXA8MT70 800 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 CTAGE5O15320 804 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 ADCY6O43306 1168 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 PRC1O43663 620 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 B4GALT4O60513 344 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 BAIAP3O94812 1187 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 MMP3P08254 477 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 CSF2RAP15509 400 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 EIF2AK2P19525 551 aaKnown RBP8.62□□□□□ -1.03
CPNE1-226ENST00000486021 PTH1RQ03431 593 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 TROAPQ12815 778 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 PGM5Q15124 567 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 NBPF20Q3BBV1 942 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 TMEM240Q5SV17 173 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 C9orf50Q5SZB4 431 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 RASGRP2Q7LDG7 609 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 SESTD1Q86VW0 696 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 STAG2Q8N3U4 1231 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 PPTC7Q8NI37 304 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 PHOSPHO2Q8TCD6 241 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 AFAP1L1Q8TED9 768 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 CCDC136Q96JN2 1154 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 NEK1Q96PY6 1258 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 SLC9A7Q96T83 725 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.62□□□□□ -1.032e-15■■■■■ 106
CPNE1-226ENST00000486021 PDCD2LQ9BRP1 358 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 ESYT1Q9BSJ8 1104 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 SEMA6BQ9H3T3 888 aa8.62□□□□□ -1.03
CPNE1-226ENST00000486021 ZNF215Q9UL58 517 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-226ENST00000486021 FIBPO43427 364 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 CDC45O75419 566 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 REC8O95072 547 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 FOSP01100 380 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-226ENST00000486021 FOSL2P15408 326 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 DNAJB2P25686 324 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 PSMA5P28066 241 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 CYP2C18P33260 490 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 KCNJ6P48051 423 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 RCAN1P53805 252 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 CHMP4BP1P59074 171 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 PTGISQ16647 500 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 LY6KQ17RY6 165 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 CCDC62Q6P9F0 684 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 FAM43BQ6ZT52 329 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-226ENST00000486021 ZNF365Q70YC5 407 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 CHST3Q7LGC8 479 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 VSIG10LQ86VR7 867 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 FCHSD1Q86WN1 690 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 MB21D2Q8IYB1 491 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-226ENST00000486021 IGDCC4Q8TDY8 1250 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 CCDC12Q8WUD4 166 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-226ENST00000486021 TIFAQ96CG3 184 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 SPATA33Q96N06 139 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 PIGSQ96S52 555 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 NOC4LQ9BVI4 516 aaKnown RBP8.61□□□□□ -1.03
CPNE1-226ENST00000486021 FTOQ9C0B1 505 aaKnown RBP eCLIP8.61□□□□□ -1.03
CPNE1-226ENST00000486021 ZNF576Q9H609 170 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 DDX41Q9UJV9 622 aaKnown RBP8.61□□□□□ -1.03
CPNE1-226ENST00000486021 SCN5AQ14524 2016 aa8.61□□□□□ -1.03
CPNE1-226ENST00000486021 MYH9P35579 1960 aaKnown RBP8.61□□□□□ -1.03
CPNE1-226ENST00000486021 EMSYQ7Z589 1322 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 DOCK5Q9H7D0 1870 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 PIK3CDO00329 1044 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 SLC27A2O14975 620 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 EPB41L2O43491 1005 aaKnown RBP8.6□□□□□ -1.03
CPNE1-226ENST00000486021 CAND2O75155 1236 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 CCL23P55773 120 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 PSMC6P62333 389 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 AKAP17AQ02040 695 aaKnown RBP8.6□□□□□ -1.03
CPNE1-226ENST00000486021 PTK7Q13308 1070 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 NECTIN1Q15223 517 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 CELF3Q5SZQ8 465 aaKnown RBP8.6□□□□□ -1.03
CPNE1-226ENST00000486021 PCNX4Q63HM2 1172 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 CREB3L3Q68CJ9 461 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 Q7L0L9 218 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 FANCBQ8NB91 859 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 IL27Q8NEV9 243 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 AFG1LQ8WV93 481 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 PURBQ96QR8 312 aaKnown RBP8.6□□□□□ -1.03
CPNE1-226ENST00000486021 SENP7Q9BQF6 1050 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 CPVLQ9H3G5 476 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 PSTPIP2Q9H939 334 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 LY9Q9HBG7 655 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 TCEAL9Q9UHQ7 104 aa8.6□□□□□ -1.03
CPNE1-226ENST00000486021 PCDHA11Q9Y5I1 949 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 262.7 ms