RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 DDX53Q86TM3 631 aaKnown RBP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 LCA5Q86VQ0 697 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 HSCBQ8IWL3 235 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 LRRN4CLQ8ND94 238 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 OR13H1Q8NG92 308 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 SLC7A14Q8TBB6 771 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 GRIN3AQ8TCU5 1115 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 DDX54Q8TDD1 881 aaKnown RBP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 USP13Q92995 863 aaPredicted RBP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 ATP6V1E2Q96A05 226 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 TMEM87BQ96K49 555 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 CRB3Q9BUF7 120 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 SLC12A5Q9H2X9 1139 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 ANTXR1Q9H6X2 564 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 EFCC1Q9HA90 598 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 SLC52A2Q9HAB3 445 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 ATP6V0A4Q9HBG4 840 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 BLOC1S4Q9NUP1 217 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 ARGLU1Q9NWB6 273 aaPredicted RBP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 WBP1LQ9NX94 342 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 NKIRAS2Q9NYR9 191 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 FBXO10Q9UK96 956 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 POLR3KQ9Y2Y1 108 aaPredicted RBP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 ACACBO00763 2458 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 HELZ2Q9BYK8 2649 aaKnown RBP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 TET3O43151 1660 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 CCDC88BA6NC98 1476 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 PLA2R1Q13018 1463 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 EFCAB6Q5THR3 1501 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 TCRBV16S1A1N1A0A5B0 115 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 GTPBP10A4D1E9 387 aaKnown RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 SLC22A31A6NKX4 558 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 M0R2C6 588 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 MEN1O00255 615 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 NOP56O00567 594 aaKnown RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 AREL1O15033 823 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 NCAM2O15394 837 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 PQBP1O60828 265 aaKnown RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 HTR3BO95264 441 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 MT-CO1P00395 513 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 ACRP10323 421 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 TGFB3P10600 412 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 SCP2P22307 547 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 PSMA3P25788 255 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 ARNTP27540 789 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 ELF1P32519 619 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 KRT9P35527 623 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 IARSP41252 1262 aaKnown RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 PIK3CAP42336 1068 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 RAD52P43351 418 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 GRIA4P48058 902 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 LSSP48449 732 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 KRT83P78385 493 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 MPP1Q00013 466 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 PFKPQ01813 784 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 ROR1Q01973 937 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 TNFAIP2Q03169 654 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 WASHC5Q12768 1159 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 ZNF460Q14592 562 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 TTC31Q49AM3 519 aaPredicted RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 PIK3R6Q5UE93 754 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 ZCCHC8Q6NZY4 707 aaKnown RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 DARS2Q6PI48 645 aaKnown RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 POTEHQ6S545 545 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 B3GNT9Q6UX72 402 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 PRR23BQ6ZRT6 265 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 CCDC149Q6ZUS6 474 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 FASTKD5Q7L8L6 764 aaKnown RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 CRACR2BQ8N4Y2 399 aaPredicted RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 FAM26EQ8N5C1 309 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 EHBP1Q8NDI1 1231 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 KLHL6Q8WZ60 621 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 ATG4CQ96DT6 458 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 LTV1Q96GA3 475 aaPredicted RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 AGBL1Q96MI9 1066 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 TAAR9Q96RI9 348 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 ZKSCAN3Q9BRR0 538 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 BHLHE41Q9C0J9 482 aaPredicted RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 LMAN2LQ9H0V9 348 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 NUP62CLQ9H1M0 184 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 ZNF576Q9H609 170 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 CBX8Q9HC52 389 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 CRTAC1Q9NQ79 661 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 RRN3Q9NYV6 651 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 KANSL3Q9P2N6 904 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 PPARGC1AQ9UBK2 798 aaKnown RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 SYNPO2Q9UMS6 1093 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 PCDHB10Q9UN67 800 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 CEP131Q9UPN4 1083 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 DNM3Q9UQ16 869 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 FCF1Q9Y324 198 aaKnown RBP3.36□□□□□ -1.87
HMGN4-202ENST00000477243 TACC3Q9Y6A5 838 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 TNIKQ9UKE5 1360 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 UACAQ9BZF9 1416 aa3.36□□□□□ -1.87
HMGN4-202ENST00000477243 JMJD1CQ15652 2540 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 SYNMO15061 1565 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 LRRC10BA6NIK2 292 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 RASA4BC9J798 803 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 M0R3H8 397 aa3.35□□□□□ -1.87
HMGN4-202ENST00000477243 FZD9O00144 591 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms