RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 LUC7L3O95232 432 aaKnown RBP12.54□□□□□ -0.4
U2AF1-209ENST00000475639 TTC4O95801 387 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 CDR2Q01850 454 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 CNNM4Q6P4Q7 775 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 KLHL7Q8IXQ5 586 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 MRPL46Q9H2W6 279 aaKnown RBP12.54□□□□□ -0.4
U2AF1-209ENST00000475639 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 GSTA1P08263 222 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 GSTA2P09210 222 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 IL15P40933 162 aaPredicted RBP12.54□□□□□ -0.4
U2AF1-209ENST00000475639 PDE4DQ08499 809 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 KCNB1Q14721 858 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 CSGALNACT2Q8N6G5 542 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 ZBTB10Q96DT7 871 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 CHP1Q99653 195 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 ZC3H12CQ9C0D7 883 aaKnown RBP12.54□□□□□ -0.4
U2AF1-209ENST00000475639 THOC1Q96FV9 657 aaKnown RBP12.53□□□□□ -0.4
U2AF1-209ENST00000475639 ZIM3Q96PE6 472 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 DRC3Q9H069 523 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 CCDC169A6NNP5 214 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 RFC4P35249 363 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 MRPS25P82663 173 aaKnown RBP12.53□□□□□ -0.4
U2AF1-209ENST00000475639 ZC3H12AQ5D1E8 599 aaKnown RBP12.53□□□□□ -0.4
U2AF1-209ENST00000475639 HAUS3Q68CZ6 603 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 TRIM68Q6AZZ1 485 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 PEX26Q7Z412 305 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 AIFM3Q96NN9 605 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 ACTR5Q9H9F9 607 aaPredicted RBP12.53□□□□□ -0.4
U2AF1-209ENST00000475639 PFDN6O15212 129 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 FAM107AO95990 144 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 HELBQ8NG08 1087 aaPredicted RBP12.53□□□□□ -0.4
U2AF1-209ENST00000475639 RWDD2BP57060 319 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 ALS2CLQ60I27 953 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 ANKRD42Q8N9B4 389 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 TRIM4Q9C037 500 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 SCINQ9Y6U3 715 aa12.53□□□□□ -0.4
U2AF1-209ENST00000475639 MED1Q15648 1581 aaPredicted RBP12.52□□□□□ -0.4
U2AF1-209ENST00000475639 NDUFA10O95299 355 aa12.52□□□□□ -0.4
U2AF1-209ENST00000475639 IFNB1P01574 187 aa12.52□□□□□ -0.4
U2AF1-209ENST00000475639 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.4
U2AF1-209ENST00000475639 LRRC1Q9BTT6 524 aa12.52□□□□□ -0.4
U2AF1-209ENST00000475639 CCDC68Q9H2F9 335 aa12.52□□□□□ -0.4
U2AF1-209ENST00000475639 RIPOR2Q9Y4F9 1068 aa12.52□□□□□ -0.4
U2AF1-209ENST00000475639 AKAP12Q02952 1782 aa12.52□□□□□ -0.4
U2AF1-209ENST00000475639 ENO4A6NNW6 628 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 GRM1Q13255 1194 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 SNX1Q13596 522 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 CCDC138Q96M89 665 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 PLIN2Q99541 437 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 USTQ9Y2C2 406 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
U2AF1-209ENST00000475639 ATP5JP18859 108 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 CDKAL1Q5VV42 579 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 BSPRYQ5W0U4 402 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 NXNQ6DKJ4 435 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 ITIH6Q6UXX5 1313 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 ELOA2Q8IYF1 753 aaPredicted RBP12.52□□□□□ -0.41
U2AF1-209ENST00000475639 SUCLG2Q96I99 432 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 SH2D4AQ9H788 454 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.52□□□□□ -0.41
U2AF1-209ENST00000475639 MCM9Q9NXL9 1143 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 DBNLQ9UJU6 430 aaKnown RBP12.52□□□□□ -0.41
U2AF1-209ENST00000475639 IQSEC3Q9UPP2 1182 aaPredicted RBP12.52□□□□□ -0.41
U2AF1-209ENST00000475639 CLEC11AQ9Y240 323 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.41
U2AF1-209ENST00000475639 EPN1Q9Y6I3 576 aaPredicted RBP12.52□□□□□ -0.41
U2AF1-209ENST00000475639 RNF8O76064 485 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 STRN3Q13033 797 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 ANKRD20A8PQ5CZ79 823 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 PALM2Q8IXS6 379 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 HOOK2Q96ED9 719 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 SLC39A2Q9NP94 309 aa12.52□□□□□ -0.41
U2AF1-209ENST00000475639 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
U2AF1-209ENST00000475639 F8W031 263 aaPredicted RBP12.51□□□□□ -0.41
U2AF1-209ENST00000475639 SART1O43290 800 aaKnown RBP12.51□□□□□ -0.41
U2AF1-209ENST00000475639 MGRN1O60291 552 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 SLC7A5Q01650 507 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 KLHL30Q0D2K2 578 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 LETM2Q2VYF4 491 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 EMC10Q5UCC4 262 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 CYFIP2Q96F07 1278 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 GLT8D2Q9H1C3 349 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 NUCKS1Q9H1E3 243 aaKnown RBP12.51□□□□□ -0.41
U2AF1-209ENST00000475639 HAUS4Q9H6D7 363 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 CAND2O75155 1236 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 SNUPNO95149 360 aaKnown RBP12.51□□□□□ -0.41
U2AF1-209ENST00000475639 BCRP11274 1271 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
U2AF1-209ENST00000475639 RAP1GDS1P52306 607 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 GRIN1Q05586 938 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 SF3A3Q12874 501 aaKnown RBP eCLIP12.51□□□□□ -0.41
U2AF1-209ENST00000475639 SPATA1Q5VX52 437 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms