RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CRY2Q49AN0 593 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 C15orf52Q6ZUT6 534 aaKnown RBP14.4□□□□□ -0.1
CCNL1-216ENST00000475298 CLEC10AQ8IUN9 316 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 CCDC13Q8IYE1 715 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 ZNF483Q8TF39 744 aaPredicted RBP14.4□□□□□ -0.1
CCNL1-216ENST00000475298 AENQ8WTP8 325 aaKnown RBP14.4□□□□□ -0.1
CCNL1-216ENST00000475298 PIGSQ96S52 555 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 PYM1Q9BRP8 204 aaKnown RBP14.4□□□□□ -0.1
CCNL1-216ENST00000475298 SLC40A1Q9NP59 571 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 SMCO2A6NFE2 343 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 USP17L5A8MUK1 530 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 CCNT1O60563 726 aaKnown RBP14.4□□□□□ -0.1
CCNL1-216ENST00000475298 NAP1L1P55209 391 aaKnown RBP14.4□□□□□ -0.1
CCNL1-216ENST00000475298 ERVK-24P63145 666 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 PICALMQ13492 652 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 CCDC178Q5BJE1 867 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 TTMPQ5BVD1 217 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 IRF2BP1Q8IU81 584 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 RMND1Q9NWS8 449 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 FRMPD2Q68DX3 1309 aaPredicted RBP14.4□□□□□ -0.1
CCNL1-216ENST00000475298 MYH1P12882 1939 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 GOLGA8KD6RF30 607 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 F8W031 263 aaPredicted RBP14.39□□□□□ -0.11
CCNL1-216ENST00000475298 C6orf229H3BNL8 230 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 KLRC4O43908 158 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 PDHBP11177 359 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 ATP2B4P23634 1241 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 EIF6P56537 245 aaKnown RBP14.39□□□□□ -0.11
CCNL1-216ENST00000475298 TXNRD1Q16881 649 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 KIRREL3Q8IZU9 778 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 ADSSL1Q8N142 457 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 NEDD1Q8NHV4 660 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 TBC1D16Q8TBP0 767 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 ARL8AQ96BM9 186 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 ZMYND12Q9H0C1 365 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 TMEM260Q9NX78 707 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 FRMD3A2A2Y4 597 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 RIMBP2O15034 1052 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 SRGAP2O75044 1071 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 PLCG1P19174 1290 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 CLNS1AP54105 237 aaKnown RBP14.39□□□□□ -0.11
CCNL1-216ENST00000475298 PLCB4Q15147 1175 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 TATDN2Q93075 761 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 RRP36Q96EU6 259 aaKnown RBP14.39□□□□□ -0.11
CCNL1-216ENST00000475298 GJD4Q96KN9 370 aaPredicted RBP14.39□□□□□ -0.11
CCNL1-216ENST00000475298 NUP88Q99567 741 aaPredicted RBP14.39□□□□□ -0.11
CCNL1-216ENST00000475298 SPZ1Q9BXG8 430 aa14.39□□□□□ -0.11
CCNL1-216ENST00000475298 BIN2Q9UBW5 565 aaPredicted RBP14.39□□□□□ -0.11
CCNL1-216ENST00000475298 LRRC10BA6NIK2 292 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 ENC1O14682 589 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 NAA35Q5VZE5 725 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 CNGA4Q8IV77 575 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 RBM17Q96I25 401 aaKnown RBP14.38□□□□□ -0.11
CCNL1-216ENST00000475298 ABHD10Q9NUJ1 306 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 TRIM10Q9UDY6 481 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 EME2A4GXA9 379 aaPredicted RBP14.38□□□□□ -0.11
CCNL1-216ENST00000475298 PES1O00541 588 aaKnown RBP14.38□□□□□ -0.11
CCNL1-216ENST00000475298 ZEB2O60315 1214 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 EPB41P11171 864 aaKnown RBP14.38□□□□□ -0.11
CCNL1-216ENST00000475298 TECP42680 631 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 GTF2IP78347 998 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 UBXN1Q04323 297 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 GALNT17Q6IS24 598 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 CABP7Q86V35 215 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 LRRC47Q8N1G4 583 aaKnown RBP14.38□□□□□ -0.11
CCNL1-216ENST00000475298 CCSER1Q9C0I3 900 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 ZNF287Q9HBT7 754 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 KBTBD4Q9NVX7 518 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
CCNL1-216ENST00000475298 UBR3Q6ZT12 1888 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 OR52Z1P0C646 297 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 SF3B2Q13435 895 aaKnown RBP14.37□□□□□ -0.11
CCNL1-216ENST00000475298 NONOQ15233 471 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCNL1-216ENST00000475298 CEP57Q86XR8 500 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 TBCKQ8TEA7 893 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 CALR3Q96L12 384 aaKnown RBP14.37□□□□□ -0.11
CCNL1-216ENST00000475298 MXD3Q9BW11 206 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 CENPHQ9H3R5 247 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 FAM184BQ9ULE4 1060 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 DAGLAQ9Y4D2 1042 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 A0A1B0GUA9 196 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 PSMD14O00487 310 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 SKAP2O75563 359 aaPredicted RBP14.37□□□□□ -0.11
CCNL1-216ENST00000475298 ATP1A1P05023 1023 aaKnown RBP14.37□□□□□ -0.11
CCNL1-216ENST00000475298 SLURP2P0DP57 97 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 SPAG1Q07617 926 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 SEPT12Q8IYM1 358 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 MAGEC3Q8TD91 643 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 HPS3Q969F9 1004 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 COA7Q96BR5 231 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 LZTS2Q9BRK4 669 aa14.37□□□□□ -0.11
CCNL1-216ENST00000475298 SEC63Q9UGP8 760 aaKnown RBP14.37□□□□□ -0.11
CCNL1-216ENST00000475298 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.37□□□□□ -0.11
CCNL1-216ENST00000475298 GAKO14976 1311 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 KRT9P35527 623 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 SEMA3FQ13275 785 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 ZKSCAN8Q15776 578 aaPredicted RBP14.36□□□□□ -0.11
CCNL1-216ENST00000475298 SNCBQ16143 134 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 MICALCLQ6ZW33 695 aa14.36□□□□□ -0.11
CCNL1-216ENST00000475298 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms